SHOGoiN Cell Transcriptome: Project ID SRP125954

No.	Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project									Assay		Source Cell												Technology								Data
No.	Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Project Description	Project Submission Date	Organization Name	Stable Contact Information	Reference Submission Status	Reference Authors	Reference Title	Reference Pubmed Id	Assay Type	Assay Factor	Sample Id	SHOGoiN Cell Id	Source Cell Type	Source Organism	Race Or Strain	Age Or Stage	Source Tissue Or Organ	Source Cell Karyotype	Cell Lineage	Organism Genetic Information	Health Status	Source Provider	Assay Technology	Assay Detection Instrumentation	Assay Detection Instrument Vendor	Assessed Material	Source Cell Format	Source Cell Preparation Method	Source Cell Identidication Method	Source Cell Treatment	Data Id	Data Type	Data Processing Method	Data Processing Software And Version	Data Normalization Method	Data Normalization Software Name And Version	Data Analytical Software And Version	Reference Sequence Source	Genome Annotation Ref
1	GSM2871123-1	7020001000000000000000-715	Sequence Read Archive	SRP125954	SRP125954_T1	Mapping human pluripotent stem cell differentiation pathways via high throughput single-cell RNA-sequencing	https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE107552	30-Nov-17	Zhejiang University	Haide Chen, chenhyde628@gmail.com	Published	Han X, Chen H, Huang D	Mapping human pluripotent stem cell differentiation pathways using high throughput single-cell RNA-sequencing.	29622030	Transcriptome	7020001000000000000000-715	GSM2871123-1	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	Primed H9		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2000	Illumina	Total RNA		Single cell, cultured	Fluidigm C1 chip		SRR7093664	Sequence		STAR v2.5.2a, featureCounts v1.5.1				GRCh38
2	GSM2871123-2	7020001000000000000000-715	Sequence Read Archive	SRP125954	SRP125954_T2	Mapping human pluripotent stem cell differentiation pathways via high throughput single-cell RNA-sequencing	https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE107553	30-Nov-17	Zhejiang University	Haide Chen, chenhyde628@gmail.com	Published	Han X, Chen H, Huang D	Mapping human pluripotent stem cell differentiation pathways using high throughput single-cell RNA-sequencing.	29622030	Transcriptome	7020001000000000000000-715	GSM2871123-2	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	Primed H9		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2000	Illumina	Total RNA		Single cell, cultured	Fluidigm C1 chip		SRR7093663	Sequence		STAR v2.5.2a, featureCounts v1.5.1				GRCh38
3	GSM2871123-3	7020001000000000000000-715	Sequence Read Archive	SRP125954	SRP125954_T3	Mapping human pluripotent stem cell differentiation pathways via high throughput single-cell RNA-sequencing	https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE107554	30-Nov-17	Zhejiang University	Haide Chen, chenhyde628@gmail.com	Published	Han X, Chen H, Huang D	Mapping human pluripotent stem cell differentiation pathways using high throughput single-cell RNA-sequencing.	29622030	Transcriptome	7020001000000000000000-715	GSM2871123-3	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	Primed H9		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2000	Illumina	Total RNA		Single cell, cultured	Fluidigm C1 chip		SRR7093662	Sequence		STAR v2.5.2a, featureCounts v1.5.1				GRCh38
4	GSM2871128	7020001000000000000000-715	Sequence Read Archive	SRP125954	SRP125954_T4	Mapping human pluripotent stem cell differentiation pathways via high throughput single-cell RNA-sequencing	https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE107555	30-Nov-17	Zhejiang University	Haide Chen, chenhyde628@gmail.com	Published	Han X, Chen H, Huang D	Mapping human pluripotent stem cell differentiation pathways using high throughput single-cell RNA-sequencing.	29622030	Transcriptome	7020001000000000000000-715	GSM2871128	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	Day 10 reset H9		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2000	Illumina	Total RNA		Single cell, cultured	Fluidigm C1 chip		SRR6335130	Sequence		STAR v2.5.2a, featureCounts v1.5.1				GRCh38
5	GSM2871129	7020001000000000000000-715	Sequence Read Archive	SRP125954	SRP125954_T5	Mapping human pluripotent stem cell differentiation pathways via high throughput single-cell RNA-sequencing	https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE107556	30-Nov-17	Zhejiang University	Haide Chen, chenhyde628@gmail.com	Published	Han X, Chen H, Huang D	Mapping human pluripotent stem cell differentiation pathways using high throughput single-cell RNA-sequencing.	29622030	Transcriptome	7020001000000000000000-715	GSM2871129	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	Day 20 reset H9 rep1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2000	Illumina	Total RNA		Single cell, cultured	Fluidigm C1 chip		SRR6335131	Sequence		STAR v2.5.2a, featureCounts v1.5.1				GRCh38
6	GSM2871130	7020001000000000000000-715	Sequence Read Archive	SRP125954	SRP125954_T6	Mapping human pluripotent stem cell differentiation pathways via high throughput single-cell RNA-sequencing	https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE107557	30-Nov-17	Zhejiang University	Haide Chen, chenhyde628@gmail.com	Published	Han X, Chen H, Huang D	Mapping human pluripotent stem cell differentiation pathways using high throughput single-cell RNA-sequencing.	29622030	Transcriptome	7020001000000000000000-715	GSM2871130	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	Day 20 reset H9 rep1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2000	Illumina	Total RNA		Single cell, cultured	Fluidigm C1 chip		SRR6335132	Sequence		STAR v2.5.2a, featureCounts v1.5.1				GRCh38
7	GSM3015986	7020001000000000000000-715	Sequence Read Archive	SRP125954	SRP125954_T7	Mapping human pluripotent stem cell differentiation pathways via high throughput single-cell RNA-sequencing	https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE107558	30-Nov-17	Zhejiang University	Haide Chen, chenhyde628@gmail.com	Published	Han X, Chen H, Huang D	Mapping human pluripotent stem cell differentiation pathways using high throughput single-cell RNA-sequencing.	29622030	Transcriptome	7020001000000000000000-715	GSM3015986	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	Primed H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2000	Illumina	Total RNA		Single cell, cultured	Fluidigm C1 chip		SRR6745454	Sequence		STAR v2.5.2a, featureCounts v1.5.1				GRCh38
8	GSM3015987	7020001000000000000000-715	Sequence Read Archive	SRP125954	SRP125954_T8	Mapping human pluripotent stem cell differentiation pathways via high throughput single-cell RNA-sequencing	https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE107559	30-Nov-17	Zhejiang University	Haide Chen, chenhyde628@gmail.com	Published	Han X, Chen H, Huang D	Mapping human pluripotent stem cell differentiation pathways using high throughput single-cell RNA-sequencing.	29622030	Transcriptome	7020001000000000000000-715	GSM3015987	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	Primed na_ve H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2000	Illumina	Total RNA		Single cell, cultured	Fluidigm C1 chip		SRR6745455	Sequence		STAR v2.5.2a, featureCounts v1.5.1				GRCh38