SHOGoiN Cell Transcriptome: GSM1080196
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1080196 Profile download | 5030206000000000000000-761 | Sequence Read Archive | SRP018525 | SRP018525_T2 | Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-Sequencing | Transcriptome | Secondary oocyte (Ovarian follicle) | Mouse | Genitalia | RNA-seq | HiSeq 2000 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSMUSG00000018238 | Gdf9 | growth differentiation factor 9 | 84.9026 |
| 2 | ENSMUSG00000042279 | H1foo | H1 histone family, member O, oocyte-specific | 83.3085 |
| 3 | ENSMUSG00000021395 | Spin1 | spindlin 1 | 55.2802 |
| 4 | ENSMUSG00000032191 | Bcl2l10 | Bcl2-like 10 | 49.5447 |
| 5 | ENSMUSG00000038925 | E330034G19Rik | RIKEN cDNA E330034G19 gene | 49.0417 |
| 6 | ENSMUSG00000041359 | Tcl1 | T cell lymphoma breakpoint 1 | 46.5989 |
| 7 | ENSMUSG00000074369 | Obox2 | oocyte specific homeobox 2 | 43.1832 |
| 8 | ENSMUSG00000031538 | Plat | plasminogen activator, tissue | 37.2736 |
| 9 | ENSMUSG00000064351 | mt-Co1 | mitochondrially encoded cytochrome c oxidase I | 32.8597 |
| 10 | ENSMUSG00000031353 | Rbbp7 | retinoblastoma binding protein 7, chromatin remodeling factor | 32.4882 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 54524 | ENSMUSG00000117329 | zinc finger protein 541 (Zfp541) pseudogene | -0.0962 | |
| 54523 | ENSMUSG00000117328 | novel transcript, antisense to Smoc2 | -0.0962 | |
| 54522 | ENSMUSG00000117326 | zinc ribbon domain containing 1, antisense (Znrd1as) pseudogene | -0.0962 | |
| 54521 | ENSMUSG00000117325 | Opa interacting protein 5 (Oip5) pseudogene | -0.0962 | |
| 54520 | ENSMUSG00000117324 | novel transcript, antisense to Dscam | -0.0962 | |
| 54519 | ENSMUSG00000117323 | novel transcript | -0.0962 | |
| 54518 | ENSMUSG00000117322 | novel transcript, antisense to Zfp213 | -0.0962 | |
| 54517 | ENSMUSG00000117321 | ribosomal protein S27 (Rps27) pseudogene | -0.0962 | |
| 54516 | ENSMUSG00000117320 | ribosomal protein S6 (Rps6) pseudogene | -0.0962 | |
| 54515 | ENSMUSG00000117319 | exocrine gland-secreting peptide pseudogene | -0.0962 |
