Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1080196

Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1080196 Profile download	5030206000000000000000-761	Sequence Read Archive	SRP018525	SRP018525_T2	Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-Sequencing	Transcriptome	Secondary oocyte (Ovarian follicle)	Mouse	Genitalia	RNA-seq	HiSeq 2000	Sequence

Histogram (Expression count)

Top 10 up-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
1	ENSMUSG00000018238	Gdf9	growth differentiation factor 9	84.9026
2	ENSMUSG00000042279	H1f8	H1.8 linker histone	83.3085
3	ENSMUSG00000021395	Spin1	spindlin 1	55.2802
4	ENSMUSG00000032191	Bcl2l10	Bcl2-like 10	49.5447
5	ENSMUSG00000038925	E330034G19Rik	RIKEN cDNA E330034G19 gene	49.0417
6	ENSMUSG00000041359	Tcl1	T cell lymphoma breakpoint 1	46.5989
7	ENSMUSG00000074369	Obox2	oocyte specific homeobox 2	43.1832
8	ENSMUSG00000031538	Plat	plasminogen activator, tissue	37.2736
9	ENSMUSG00000064351	mt-Co1	mitochondrially encoded cytochrome c oxidase I	32.8597
10	ENSMUSG00000031353	Rbbp7	retinoblastoma binding protein 7, chromatin remodeling factor	32.4882

Bottom 10 down-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
54189	ENSMUSG00000116942	Gm49744	predicted gene, 49744	-0.0962
54188	ENSMUSG00000116941	Gm46578	predicted gene, 46578	-0.0962
54187	ENSMUSG00000116940	Gm7450	predicted gene 7450	-0.0962
54186	ENSMUSG00000116939	Gm49619	predicted gene, 49619	-0.0962
54185	ENSMUSG00000116938	Gm49645	predicted gene, 49645	-0.0962
54184	ENSMUSG00000116937	Gm41480	predicted gene, 41480	-0.0962
54183	ENSMUSG00000116935	Gpr31a	G protein-coupled receptor 31, D17Leh66a region	-0.0962
54182	ENSMUSG00000116934	Gm3292	predicted gene 3292	-0.0962
54181	ENSMUSG00000116933	Atp5o	ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	-0.0962
54180	ENSMUSG00000116932	Fpr-rs5	formyl peptide receptor, related sequence 5	-0.0962

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	Z-score

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