Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1080200

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1080200


Profile download
7010000000000000000000-770Sequence Read ArchiveSRP018525SRP018525_T3Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome2-cell embryo cell (2-cell embryo)MouseEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 131.6003
2 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 106.1152
3 ENSMUSG00000064345 mt-Nd2 mitochondrially encoded NADH dehydrogenase 2 76.7532
4 ENSMUSG00000064363 mt-Nd4 mitochondrially encoded NADH dehydrogenase 4 74.0689
5 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 70.3380
6 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 68.2310
7 ENSMUSG00000064367 mt-Nd5 mitochondrially encoded NADH dehydrogenase 5 32.9833
8 ENSMUSG00000064337 mt-Rnr1 mitochondrially encoded 12S rRNA 19.6052
9 ENSMUSG00000005610 Eif4g2 eukaryotic translation initiation factor 4, gamma 2 8.7292
10 ENSMUSG00000057113 Npm1 nucleophosmin 1 8.6377

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54189 ENSMUSG00000116949 Gm7177 predicted gene 7177 -0.0660
54188 ENSMUSG00000116947 2410003I16Rik RIKEN cDNA 2410003I16 gene -0.0660
54187 ENSMUSG00000116945 Gm49663 predicted gene, 49663 -0.0660
54186 ENSMUSG00000116944 Gm7477 predicted gene 7477 -0.0660
54185 ENSMUSG00000116943 Gm18237 predicted gene, 18237 -0.0660
54184 ENSMUSG00000116942 Gm49744 predicted gene, 49744 -0.0660
54183 ENSMUSG00000116941 Gm46578 predicted gene, 46578 -0.0660
54182 ENSMUSG00000116940 Gm7450 predicted gene 7450 -0.0660
54181 ENSMUSG00000116939 Gm49619 predicted gene, 49619 -0.0660
54180 ENSMUSG00000116938 Gm49645 predicted gene, 49645 -0.0660

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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