SHOGoiN Cell Transcriptome: GSM1080201

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1080201


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7010000000000000000000-770Sequence Read ArchiveSRP018525SRP018525_T4Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome2-cell embryo cell (2-cell embryo)MouseEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 107.9233
2 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 95.6645
3 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 75.0966
4 ENSMUSG00000064345 mt-Nd2 mitochondrially encoded NADH dehydrogenase 2 71.5626
5 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 67.8315
6 ENSMUSG00000064363 mt-Nd4 mitochondrially encoded NADH dehydrogenase 4 63.1840
7 ENSMUSG00000064367 mt-Nd5 mitochondrially encoded NADH dehydrogenase 5 33.6107
8 ENSMUSG00000064337 mt-Rnr1 mitochondrially encoded 12S rRNA 16.0946
9 ENSMUSG00000057113 Npm1 nucleophosmin 1 14.5129
10 ENSMUSG00000021477 Ctsl cathepsin L 14.3468

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54189 ENSMUSG00000116943 Gm18237 predicted gene, 18237 -0.1166
54188 ENSMUSG00000116942 Gm49744 predicted gene, 49744 -0.1166
54187 ENSMUSG00000116941 Gm46578 predicted gene, 46578 -0.1166
54186 ENSMUSG00000116939 Gm49619 predicted gene, 49619 -0.1166
54185 ENSMUSG00000116938 Gm49645 predicted gene, 49645 -0.1166
54184 ENSMUSG00000116937 Gm41480 predicted gene, 41480 -0.1166
54183 ENSMUSG00000116936 Bod1-ps biorientation of chromosomes in cell division 1, pseudogene -0.1166
54182 ENSMUSG00000116935 Gpr31a G protein-coupled receptor 31, D17Leh66a region -0.1166
54181 ENSMUSG00000116934 Gm3292 predicted gene 3292 -0.1166
54180 ENSMUSG00000116933 Atp5o ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit -0.1166

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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