Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1080201

Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1080201 Profile download	7010000000000000000000-770	Sequence Read Archive	SRP018525	SRP018525_T4	Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-Sequencing	Transcriptome	2-cell embryo cell (2-cell embryo)	Mouse	Early embryonic tissue	RNA-seq	HiSeq 2000	Sequence

Histogram (Expression count)

Top 10 up-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
1	ENSMUSG00000064351	mt-Co1	mitochondrially encoded cytochrome c oxidase I	107.9233
2	ENSMUSG00000064370	mt-Cytb	mitochondrially encoded cytochrome b	95.6645
3	ENSMUSG00000064339	mt-Rnr2	mitochondrially encoded 16S rRNA	75.0966
4	ENSMUSG00000064345	mt-Nd2	mitochondrially encoded NADH dehydrogenase 2	71.5626
5	ENSMUSG00000064341	mt-Nd1	mitochondrially encoded NADH dehydrogenase 1	67.8315
6	ENSMUSG00000064363	mt-Nd4	mitochondrially encoded NADH dehydrogenase 4	63.1840
7	ENSMUSG00000064367	mt-Nd5	mitochondrially encoded NADH dehydrogenase 5	33.6107
8	ENSMUSG00000064337	mt-Rnr1	mitochondrially encoded 12S rRNA	16.0946
9	ENSMUSG00000057113	Npm1	nucleophosmin 1	14.5129
10	ENSMUSG00000021477	Ctsl	cathepsin L	14.3468

Bottom 10 down-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
54189	ENSMUSG00000116943	Gm18237	predicted gene, 18237	-0.1166
54188	ENSMUSG00000116942	Gm49744	predicted gene, 49744	-0.1166
54187	ENSMUSG00000116941	Gm46578	predicted gene, 46578	-0.1166
54186	ENSMUSG00000116939	Gm49619	predicted gene, 49619	-0.1166
54185	ENSMUSG00000116938	Gm49645	predicted gene, 49645	-0.1166
54184	ENSMUSG00000116937	Gm41480	predicted gene, 41480	-0.1166
54183	ENSMUSG00000116936	Bod1-ps	biorientation of chromosomes in cell division 1, pseudogene	-0.1166
54182	ENSMUSG00000116935	Gpr31a	G protein-coupled receptor 31, D17Leh66a region	-0.1166
54181	ENSMUSG00000116934	Gm3292	predicted gene 3292	-0.1166
54180	ENSMUSG00000116933	Atp5o	ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	-0.1166

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	Z-score

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