Human Omics database for
the Generation of iPS and Normal Cells
Release notes
Statistics
Document manuals
FAQ
All Modules
Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1080201
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1080201
Profile download
7010000000000000000000-770
Sequence Read Archive
SRP018525
SRP018525_T4
Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-Sequencing
Transcriptome
2-cell embryo cell (2-cell embryo)
Mouse
Early embryonic tissue
RNA-seq
HiSeq 2000
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSMUSG00000064351
mt-Co1
mitochondrially encoded cytochrome c oxidase I
107.9233
2
ENSMUSG00000064370
mt-Cytb
mitochondrially encoded cytochrome b
95.6645
3
ENSMUSG00000064339
mt-Rnr2
mitochondrially encoded 16S rRNA
75.0966
4
ENSMUSG00000064345
mt-Nd2
mitochondrially encoded NADH dehydrogenase 2
71.5626
5
ENSMUSG00000064341
mt-Nd1
mitochondrially encoded NADH dehydrogenase 1
67.8315
6
ENSMUSG00000064363
mt-Nd4
mitochondrially encoded NADH dehydrogenase 4
63.1840
7
ENSMUSG00000064367
mt-Nd5
mitochondrially encoded NADH dehydrogenase 5
33.6107
8
ENSMUSG00000064337
mt-Rnr1
mitochondrially encoded 12S rRNA
16.0946
9
ENSMUSG00000057113
Npm1
nucleophosmin 1
14.5129
10
ENSMUSG00000021477
Ctsl
cathepsin L
14.3468
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
54189
ENSMUSG00000116943
Gm18237
predicted gene, 18237
-0.1166
54188
ENSMUSG00000116942
Gm49744
predicted gene, 49744
-0.1166
54187
ENSMUSG00000116941
Gm46578
predicted gene, 46578
-0.1166
54186
ENSMUSG00000116939
Gm49619
predicted gene, 49619
-0.1166
54185
ENSMUSG00000116938
Gm49645
predicted gene, 49645
-0.1166
54184
ENSMUSG00000116937
Gm41480
predicted gene, 41480
-0.1166
54183
ENSMUSG00000116936
Bod1-ps
biorientation of chromosomes in cell division 1, pseudogene
-0.1166
54182
ENSMUSG00000116935
Gpr31a
G protein-coupled receptor 31, D17Leh66a region
-0.1166
54181
ENSMUSG00000116934
Gm3292
predicted gene 3292
-0.1166
54180
ENSMUSG00000116933
Atp5o
ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
-0.1166
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
Now loading...