SHOGoiN Cell Transcriptome: GSM1080204

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1080204


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7010000000000000000000-771Sequence Read ArchiveSRP018525SRP018525_T7Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome4-cell embryo cell (4-cell embryo)MouseEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 136.5656
2 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 95.9341
3 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 79.9072
4 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 72.1512
5 ENSMUSG00000064345 mt-Nd2 mitochondrially encoded NADH dehydrogenase 2 69.2188
6 ENSMUSG00000064363 mt-Nd4 mitochondrially encoded NADH dehydrogenase 4 59.4107
7 ENSMUSG00000064367 mt-Nd5 mitochondrially encoded NADH dehydrogenase 5 42.6696
8 ENSMUSG00000057113 Npm1 nucleophosmin 1 18.6614
9 ENSMUSG00000021477 Ctsl cathepsin L 16.3713
10 ENSMUSG00000064337 mt-Rnr1 mitochondrially encoded 12S rRNA 13.8078

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54189 ENSMUSG00000116953 9030025P20Rik RIKEN cDNA 9030025P20 gene -0.0591
54188 ENSMUSG00000116952 Gm6914 predicted gene 6914 -0.0591
54187 ENSMUSG00000116951 Gm49756 predicted gene, 49756 -0.0591
54186 ENSMUSG00000116950 Gm18564 predicted gene, 18564 -0.0591
54185 ENSMUSG00000116949 Gm7177 predicted gene 7177 -0.0591
54184 ENSMUSG00000116947 2410003I16Rik RIKEN cDNA 2410003I16 gene -0.0591
54183 ENSMUSG00000116946 Gm41442 predicted gene, 41442 -0.0591
54182 ENSMUSG00000116945 Gm49663 predicted gene, 49663 -0.0591
54181 ENSMUSG00000116944 Gm7477 predicted gene 7477 -0.0591
54180 ENSMUSG00000116943 Gm18237 predicted gene, 18237 -0.0591

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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