SHOGoiN Cell Transcriptome: GSM1080204
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1080204 Profile download | 7010000000000000000000-771 | Sequence Read Archive | SRP018525 | SRP018525_T7 | Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-Sequencing | Transcriptome | 4-cell embryo cell (4-cell embryo) | Mouse | Early embryonic tissue | RNA-seq | HiSeq 2000 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSMUSG00000064351 | mt-Co1 | mitochondrially encoded cytochrome c oxidase I | 136.5656 |
| 2 | ENSMUSG00000064370 | mt-Cytb | mitochondrially encoded cytochrome b | 95.9341 |
| 3 | ENSMUSG00000064339 | mt-Rnr2 | mitochondrially encoded 16S rRNA | 79.9072 |
| 4 | ENSMUSG00000064341 | mt-Nd1 | mitochondrially encoded NADH dehydrogenase 1 | 72.1512 |
| 5 | ENSMUSG00000064345 | mt-Nd2 | mitochondrially encoded NADH dehydrogenase 2 | 69.2188 |
| 6 | ENSMUSG00000064363 | mt-Nd4 | mitochondrially encoded NADH dehydrogenase 4 | 59.4107 |
| 7 | ENSMUSG00000064367 | mt-Nd5 | mitochondrially encoded NADH dehydrogenase 5 | 42.6696 |
| 8 | ENSMUSG00000057113 | Npm1 | nucleophosmin 1 | 18.6614 |
| 9 | ENSMUSG00000021477 | Ctsl | cathepsin L | 16.3713 |
| 10 | ENSMUSG00000064337 | mt-Rnr1 | mitochondrially encoded 12S rRNA | 13.8078 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 54189 | ENSMUSG00000116953 | 9030025P20Rik | RIKEN cDNA 9030025P20 gene | -0.0591 |
| 54188 | ENSMUSG00000116952 | Gm6914 | predicted gene 6914 | -0.0591 |
| 54187 | ENSMUSG00000116951 | Gm49756 | predicted gene, 49756 | -0.0591 |
| 54186 | ENSMUSG00000116950 | Gm18564 | predicted gene, 18564 | -0.0591 |
| 54185 | ENSMUSG00000116949 | Gm7177 | predicted gene 7177 | -0.0591 |
| 54184 | ENSMUSG00000116947 | 2410003I16Rik | RIKEN cDNA 2410003I16 gene | -0.0591 |
| 54183 | ENSMUSG00000116946 | Gm41442 | predicted gene, 41442 | -0.0591 |
| 54182 | ENSMUSG00000116945 | Gm49663 | predicted gene, 49663 | -0.0591 |
| 54181 | ENSMUSG00000116944 | Gm7477 | predicted gene 7477 | -0.0591 |
| 54180 | ENSMUSG00000116943 | Gm18237 | predicted gene, 18237 | -0.0591 |
