SHOGoiN Cell Transcriptome: GSM1080204
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1080204 Profile download | 7010000000000000000000-771 | Sequence Read Archive | SRP018525 | SRP018525_T7 | Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-Sequencing | Transcriptome | 4-cell embryo cell (4-cell embryo) | Mouse | Early embryonic tissue | RNA-seq | HiSeq 2000 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSMUSG00000064351 | mt-Co1 | mitochondrially encoded cytochrome c oxidase I | 136.5656 |
| 2 | ENSMUSG00000064370 | mt-Cytb | mitochondrially encoded cytochrome b | 95.9341 |
| 3 | ENSMUSG00000064339 | mt-Rnr2 | mitochondrially encoded 16S rRNA | 79.9072 |
| 4 | ENSMUSG00000064341 | mt-Nd1 | mitochondrially encoded NADH dehydrogenase 1 | 72.1512 |
| 5 | ENSMUSG00000064345 | mt-Nd2 | mitochondrially encoded NADH dehydrogenase 2 | 69.2188 |
| 6 | ENSMUSG00000064363 | mt-Nd4 | mitochondrially encoded NADH dehydrogenase 4 | 59.4107 |
| 7 | ENSMUSG00000064367 | mt-Nd5 | mitochondrially encoded NADH dehydrogenase 5 | 42.6696 |
| 8 | ENSMUSG00000057113 | Npm1 | nucleophosmin 1 | 18.6614 |
| 9 | ENSMUSG00000021477 | Ctsl | cathepsin L | 16.3713 |
| 10 | ENSMUSG00000064337 | mt-Rnr1 | mitochondrially encoded 12S rRNA | 13.8078 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 54524 | ENSMUSG00000117331 | exocrine gland-secreting peptide pseudogene | -0.0591 | |
| 54523 | ENSMUSG00000117330 | ribosomal protein L18A (Rpl18a) pseudogene | -0.0591 | |
| 54522 | ENSMUSG00000117329 | zinc finger protein 541 (Zfp541) pseudogene | -0.0591 | |
| 54521 | ENSMUSG00000117328 | novel transcript, antisense to Smoc2 | -0.0591 | |
| 54520 | ENSMUSG00000117326 | zinc ribbon domain containing 1, antisense (Znrd1as) pseudogene | -0.0591 | |
| 54519 | ENSMUSG00000117325 | Opa interacting protein 5 (Oip5) pseudogene | -0.0591 | |
| 54518 | ENSMUSG00000117324 | novel transcript, antisense to Dscam | -0.0591 | |
| 54517 | ENSMUSG00000117323 | novel transcript | -0.0591 | |
| 54516 | ENSMUSG00000117322 | novel transcript, antisense to Zfp213 | -0.0591 | |
| 54515 | ENSMUSG00000117321 | ribosomal protein S27 (Rps27) pseudogene | -0.0591 |
