Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1080204

Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1080204 Profile download	7010000000000000000000-771	Sequence Read Archive	SRP018525	SRP018525_T7	Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-Sequencing	Transcriptome	4-cell embryo cell (4-cell embryo)	Mouse	Early embryonic tissue	RNA-seq	HiSeq 2000	Sequence

Histogram (Expression count)

Top 10 up-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
1	ENSMUSG00000064351	mt-Co1	mitochondrially encoded cytochrome c oxidase I	136.5656
2	ENSMUSG00000064370	mt-Cytb	mitochondrially encoded cytochrome b	95.9341
3	ENSMUSG00000064339	mt-Rnr2	mitochondrially encoded 16S rRNA	79.9072
4	ENSMUSG00000064341	mt-Nd1	mitochondrially encoded NADH dehydrogenase 1	72.1512
5	ENSMUSG00000064345	mt-Nd2	mitochondrially encoded NADH dehydrogenase 2	69.2188
6	ENSMUSG00000064363	mt-Nd4	mitochondrially encoded NADH dehydrogenase 4	59.4107
7	ENSMUSG00000064367	mt-Nd5	mitochondrially encoded NADH dehydrogenase 5	42.6696
8	ENSMUSG00000057113	Npm1	nucleophosmin 1	18.6614
9	ENSMUSG00000021477	Ctsl	cathepsin L	16.3713
10	ENSMUSG00000064337	mt-Rnr1	mitochondrially encoded 12S rRNA	13.8078

Bottom 10 down-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
54189	ENSMUSG00000116953	9030025P20Rik	RIKEN cDNA 9030025P20 gene	-0.0591
54188	ENSMUSG00000116952	Gm6914	predicted gene 6914	-0.0591
54187	ENSMUSG00000116951	Gm49756	predicted gene, 49756	-0.0591
54186	ENSMUSG00000116950	Gm18564	predicted gene, 18564	-0.0591
54185	ENSMUSG00000116949	Gm7177	predicted gene 7177	-0.0591
54184	ENSMUSG00000116947	2410003I16Rik	RIKEN cDNA 2410003I16 gene	-0.0591
54183	ENSMUSG00000116946	Gm41442	predicted gene, 41442	-0.0591
54182	ENSMUSG00000116945	Gm49663	predicted gene, 49663	-0.0591
54181	ENSMUSG00000116944	Gm7477	predicted gene 7477	-0.0591
54180	ENSMUSG00000116943	Gm18237	predicted gene, 18237	-0.0591

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	Z-score

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