SHOGoiN Cell Transcriptome: GSM1080205

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1080205


Profile download
7010000000000000000000-771Sequence Read ArchiveSRP018525SRP018525_T8Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome4-cell embryo cell (4-cell embryo)MouseEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 137.2274
2 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 119.2772
3 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 69.7259
4 ENSMUSG00000064345 mt-Nd2 mitochondrially encoded NADH dehydrogenase 2 60.9048
5 ENSMUSG00000064363 mt-Nd4 mitochondrially encoded NADH dehydrogenase 4 50.5627
6 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 48.9840
7 ENSMUSG00000064367 mt-Nd5 mitochondrially encoded NADH dehydrogenase 5 28.8247
8 ENSMUSG00000057113 Npm1 nucleophosmin 1 21.2473
9 ENSMUSG00000031432 Prps1 phosphoribosyl pyrophosphate synthetase 1 12.5762
10 ENSMUSG00000021477 Ctsl cathepsin L 12.5557

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54189 ENSMUSG00000116937 Gm41480 predicted gene, 41480 -0.0765
54188 ENSMUSG00000116935 Gpr31a G protein-coupled receptor 31, D17Leh66a region -0.0765
54187 ENSMUSG00000116934 Gm3292 predicted gene 3292 -0.0765
54186 ENSMUSG00000116933 Atp5o ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit -0.0765
54185 ENSMUSG00000116932 Fpr-rs5 formyl peptide receptor, related sequence 5 -0.0765
54184 ENSMUSG00000116931 Gm18496 predicted gene, 18496 -0.0765
54183 ENSMUSG00000116930 Gm49711 predicted gene, 49711 -0.0765
54182 ENSMUSG00000116929 2210009P08Rik RIKEN cDNA 2210009P08 gene -0.0765
54181 ENSMUSG00000116928 Gm18169 predicted gene, 18169 -0.0765
54180 ENSMUSG00000116927 Gm30881 predicted gene, 30881 -0.0765

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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