Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1080206

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1080206


Profile download
7010000000000000000000-772Sequence Read ArchiveSRP018525SRP018525_T9Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome8-cell embryo cell (8-cell embryo)MouseEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 100.2824
2 ENSMUSG00000064345 mt-Nd2 mitochondrially encoded NADH dehydrogenase 2 86.4491
3 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 79.4686
4 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 72.2220
5 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 55.0710
6 ENSMUSG00000057113 Npm1 nucleophosmin 1 50.2519
7 ENSMUSG00000064363 mt-Nd4 mitochondrially encoded NADH dehydrogenase 4 36.7723
8 ENSMUSG00000064367 mt-Nd5 mitochondrially encoded NADH dehydrogenase 5 34.1102
9 ENSMUSG00000015656 Hspa8 heat shock protein 8 28.8326
10 ENSMUSG00000034391 Fbxo15 F-box protein 15 27.5547

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54189 ENSMUSG00000116952 Gm6914 predicted gene 6914 -0.0895
54188 ENSMUSG00000116951 Gm49756 predicted gene, 49756 -0.0895
54187 ENSMUSG00000116950 Gm18564 predicted gene, 18564 -0.0895
54186 ENSMUSG00000116949 Gm7177 predicted gene 7177 -0.0895
54185 ENSMUSG00000116947 2410003I16Rik RIKEN cDNA 2410003I16 gene -0.0895
54184 ENSMUSG00000116946 Gm41442 predicted gene, 41442 -0.0895
54183 ENSMUSG00000116945 Gm49663 predicted gene, 49663 -0.0895
54182 ENSMUSG00000116944 Gm7477 predicted gene 7477 -0.0895
54181 ENSMUSG00000116943 Gm18237 predicted gene, 18237 -0.0895
54180 ENSMUSG00000116942 Gm49744 predicted gene, 49744 -0.0895

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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