Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1080207
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1080207
Profile download
7010000000000000000000-772
Sequence Read Archive
SRP018525
SRP018525_T10
Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-Sequencing
Transcriptome
8-cell embryo cell (8-cell embryo)
Mouse
Early embryonic tissue
RNA-seq
HiSeq 2000
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSMUSG00000064339
mt-Rnr2
mitochondrially encoded 16S rRNA
104.0933
2
ENSMUSG00000064345
mt-Nd2
mitochondrially encoded NADH dehydrogenase 2
101.3545
3
ENSMUSG00000064341
mt-Nd1
mitochondrially encoded NADH dehydrogenase 1
83.0405
4
ENSMUSG00000064370
mt-Cytb
mitochondrially encoded cytochrome b
80.1503
5
ENSMUSG00000064351
mt-Co1
mitochondrially encoded cytochrome c oxidase I
57.5460
6
ENSMUSG00000057113
Npm1
nucleophosmin 1
39.7322
7
ENSMUSG00000064363
mt-Nd4
mitochondrially encoded NADH dehydrogenase 4
39.5917
8
ENSMUSG00000064367
mt-Nd5
mitochondrially encoded NADH dehydrogenase 5
34.9174
9
ENSMUSG00000015656
Hspa8
heat shock protein 8
23.3995
10
ENSMUSG00000034391
Fbxo15
F-box protein 15
21.6560
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
54189
ENSMUSG00000116962
Gm19000
predicted gene, 19000
-0.0783
54188
ENSMUSG00000116960
Gm49679
predicted gene, 49679
-0.0783
54187
ENSMUSG00000116959
Gm49604
predicted gene, 49604
-0.0783
54186
ENSMUSG00000116958
Gm6705
predicted gene 6705
-0.0783
54185
ENSMUSG00000116957
Gm34680
predicted gene, 34680
-0.0783
54184
ENSMUSG00000116956
Gm49610
predicted gene, 49610
-0.0783
54183
ENSMUSG00000116955
Gm49632
predicted gene, 49632
-0.0783
54182
ENSMUSG00000116954
Gm5676
predicted gene 5676
-0.0783
54181
ENSMUSG00000116953
9030025P20Rik
RIKEN cDNA 9030025P20 gene
-0.0783
54180
ENSMUSG00000116952
Gm6914
predicted gene 6914
-0.0783
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
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