Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1080207

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1080207


Profile download
7010000000000000000000-772Sequence Read ArchiveSRP018525SRP018525_T10Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome8-cell embryo cell (8-cell embryo)MouseEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 104.0933
2 ENSMUSG00000064345 mt-Nd2 mitochondrially encoded NADH dehydrogenase 2 101.3545
3 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 83.0405
4 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 80.1503
5 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 57.5460
6 ENSMUSG00000057113 Npm1 nucleophosmin 1 39.7322
7 ENSMUSG00000064363 mt-Nd4 mitochondrially encoded NADH dehydrogenase 4 39.5917
8 ENSMUSG00000064367 mt-Nd5 mitochondrially encoded NADH dehydrogenase 5 34.9174
9 ENSMUSG00000015656 Hspa8 heat shock protein 8 23.3995
10 ENSMUSG00000034391 Fbxo15 F-box protein 15 21.6560

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54189 ENSMUSG00000116962 Gm19000 predicted gene, 19000 -0.0783
54188 ENSMUSG00000116960 Gm49679 predicted gene, 49679 -0.0783
54187 ENSMUSG00000116959 Gm49604 predicted gene, 49604 -0.0783
54186 ENSMUSG00000116958 Gm6705 predicted gene 6705 -0.0783
54185 ENSMUSG00000116957 Gm34680 predicted gene, 34680 -0.0783
54184 ENSMUSG00000116956 Gm49610 predicted gene, 49610 -0.0783
54183 ENSMUSG00000116955 Gm49632 predicted gene, 49632 -0.0783
54182 ENSMUSG00000116954 Gm5676 predicted gene 5676 -0.0783
54181 ENSMUSG00000116953 9030025P20Rik RIKEN cDNA 9030025P20 gene -0.0783
54180 ENSMUSG00000116952 Gm6914 predicted gene 6914 -0.0783

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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