SHOGoiN Cell Transcriptome: GSM1080208

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1080208


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7010000000000000000000-772Sequence Read ArchiveSRP018525SRP018525_T11Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome8-cell embryo cell (8-cell embryo)MouseEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 130.9808
2 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 89.3140
3 ENSMUSG00000064345 mt-Nd2 mitochondrially encoded NADH dehydrogenase 2 79.4710
4 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 73.9362
5 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 58.9919
6 ENSMUSG00000064363 mt-Nd4 mitochondrially encoded NADH dehydrogenase 4 55.1275
7 ENSMUSG00000057113 Npm1 nucleophosmin 1 36.7327
8 ENSMUSG00000064367 mt-Nd5 mitochondrially encoded NADH dehydrogenase 5 23.8168
9 ENSMUSG00000067274 Rplp0 ribosomal protein, large, P0 21.8199
10 ENSMUSG00000011179 Odc1 ornithine decarboxylase, structural 1 21.3038

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54189 ENSMUSG00000116957 Gm34680 predicted gene, 34680 -0.0766
54188 ENSMUSG00000116956 Gm49610 predicted gene, 49610 -0.0766
54187 ENSMUSG00000116955 Gm49632 predicted gene, 49632 -0.0766
54186 ENSMUSG00000116954 Gm5676 predicted gene 5676 -0.0766
54185 ENSMUSG00000116952 Gm6914 predicted gene 6914 -0.0766
54184 ENSMUSG00000116951 Gm49756 predicted gene, 49756 -0.0766
54183 ENSMUSG00000116950 Gm18564 predicted gene, 18564 -0.0766
54182 ENSMUSG00000116949 Gm7177 predicted gene 7177 -0.0766
54181 ENSMUSG00000116945 Gm49663 predicted gene, 49663 -0.0766
54180 ENSMUSG00000116944 Gm7477 predicted gene 7477 -0.0766

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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