Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1080210
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1080210
Profile download
7010000000000000000000-773
Sequence Read Archive
SRP018525
SRP018525_T13
Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-Sequencing
Transcriptome
Morula cell (Morula)
Mouse
Early embryonic tissue
RNA-seq
HiSeq 2000
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSMUSG00000037742
Eef1a1
eukaryotic translation elongation factor 1 alpha 1
50.2115
2
ENSMUSG00000015656
Hspa8
heat shock protein 8
50.0107
3
ENSMUSG00000057113
Npm1
nucleophosmin 1
46.8210
4
ENSMUSG00000023944
Hsp90ab1
heat shock protein 90 alpha (cytosolic), class B member 1
44.8181
5
ENSMUSG00000067274
Rplp0
ribosomal protein, large, P0
43.4141
6
ENSMUSG00000064351
mt-Co1
mitochondrially encoded cytochrome c oxidase I
41.5920
7
ENSMUSG00000026246
Alppl2
alkaline phosphatase, placental-like 2
40.1898
8
ENSMUSG00000020372
Rack1
receptor for activated C kinase 1
39.9591
9
ENSMUSG00000011179
Odc1
ornithine decarboxylase, structural 1
39.1905
10
ENSMUSG00000031812
Map1lc3b
microtubule-associated protein 1 light chain 3 beta
37.0434
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
54189
ENSMUSG00000116949
Gm7177
predicted gene 7177
-0.1222
54188
ENSMUSG00000116947
2410003I16Rik
RIKEN cDNA 2410003I16 gene
-0.1222
54187
ENSMUSG00000116945
Gm49663
predicted gene, 49663
-0.1222
54186
ENSMUSG00000116944
Gm7477
predicted gene 7477
-0.1222
54185
ENSMUSG00000116943
Gm18237
predicted gene, 18237
-0.1222
54184
ENSMUSG00000116942
Gm49744
predicted gene, 49744
-0.1222
54183
ENSMUSG00000116941
Gm46578
predicted gene, 46578
-0.1222
54182
ENSMUSG00000116939
Gm49619
predicted gene, 49619
-0.1222
54181
ENSMUSG00000116938
Gm49645
predicted gene, 49645
-0.1222
54180
ENSMUSG00000116937
Gm41480
predicted gene, 41480
-0.1222
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
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