Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1080212
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1080212
Profile download
8010000000000000000000
Sequence Read Archive
SRP018525
SRP018525_T15
Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-Sequencing
Transcriptome
Blood cell
Human
Blood
RNA-seq
HiSeq 2000
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000155657
TTN
titin
86.5437
2
ENSG00000151914
DST
dystonin
25.2410
3
ENSG00000181143
MUC16
mucin 16, cell surface associated
24.6406
4
ENSG00000127603
MACF1
microtubule actin crosslinking factor 1
20.9008
5
ENSG00000183091
NEB
nebulin
17.6023
6
ENSG00000131018
SYNE1
spectrin repeat containing nuclear envelope protein 1
17.4806
7
ENSG00000175820
CCDC168
coiled-coil domain containing 168
17.0665
8
ENSG00000169876
MUC17
mucin 17, cell surface associated
16.3936
9
ENSG00000237298
TTN-AS1
TTN antisense RNA 1
16.3471
10
ENSG00000188738
FSIP2
fibrous sheath interacting protein 2
15.6612
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285122
PIGY-DT
PIGY divergent transcript
-0.4276
58502
ENSG00000285117
novel transcript
-0.4276
58501
ENSG00000285115
novel pseudogene
-0.4276
58500
ENSG00000285082
novel protein
-0.4276
58499
ENSG00000285081
Novel transcript, sense intronic to CPVL
-0.4276
58498
ENSG00000285077
ARHGAP11B
Rho GTPase activating protein 11B
-0.4276
58497
ENSG00000285076
novel pseudogene
-0.4276
58496
ENSG00000285068
novel transcript
-0.4276
58495
ENSG00000285062
poly(ADP-ribose) polymerase family member 8 (PARP8) pseudogene
-0.4276
58494
ENSG00000285057
neighbor of BRCA1 gene 1 (NBR1) pseudogene
-0.4276
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
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