Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1160113

Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1160113 Profile download	5030206000000000000000-761	Sequence Read Archive	SRP018525	SRP018525_T17	Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-Sequencing	Transcriptome	Secondary oocyte	Human	Genitalia	RNA-seq	HiSeq 2000	Sequence

Histogram (Expression count)

Top 10 up-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
1	ENSG00000198886	MT-ND4	mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4	126.9007
2	ENSG00000198804	MT-CO1	mitochondrially encoded cytochrome c oxidase I	99.3168
3	ENSG00000198763	MT-ND2	mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2	73.9857
4	ENSG00000210082	MT-RNR2	mitochondrially encoded 16S rRNA	72.7603
5	ENSG00000198712	MT-CO2	mitochondrially encoded cytochrome c oxidase II	65.7968
6	ENSG00000198888	MT-ND1	mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1	64.2455
7	ENSG00000198727	MT-CYB	mitochondrially encoded cytochrome b	46.7121
8	ENSG00000198899	MT-ATP6	mitochondrially encoded ATP synthase membrane subunit 6	35.8726
9	ENSG00000198938	MT-CO3	mitochondrially encoded cytochrome c oxidase III	31.9159
10	ENSG00000261812	TUBB8P7	tubulin beta 8 class VIII pseudogene 7	31.0564

Bottom 10 down-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
58503	ENSG00000285712		novel transcript	-0.0482
58502	ENSG00000285711	LINC02835	long intergenic non-protein coding RNA 2835	-0.0482
58501	ENSG00000285709		Novel transcript	-0.0482
58500	ENSG00000285708		novel protein	-0.0482
58499	ENSG00000285707		novel transcript	-0.0482
58498	ENSG00000285706		Novel transcript	-0.0482
58497	ENSG00000285705		novel transcript	-0.0482
58496	ENSG00000285704		novel transcript, antisense to WNK1	-0.0482
58495	ENSG00000285703		novel transcript	-0.0482
58494	ENSG00000285702		novel transcript	-0.0482

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	Z-score

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