SHOGoiN Cell Transcriptome: GSM1160114

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160114


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5030206000000000000000-761Sequence Read ArchiveSRP018525SRP018525_T18Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptomeSecondary oocyteHumanGenitaliaRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 95.0990
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 90.8489
3 ENSG00000164611 PTTG1 PTTG1 regulator of sister chromatid separation, securin 69.0913
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 64.2465
5 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 57.8228
6 ENSG00000187569 DPPA3 developmental pluripotency associated 3 56.6609
7 ENSG00000132646 PCNA proliferating cell nuclear antigen 54.8928
8 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 51.9009
9 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 51.7233
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 39.9501

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285725 novel transcript -0.0563
58502 ENSG00000285724 novel transcript -0.0563
58501 ENSG00000285723 novel protein -0.0563
58500 ENSG00000285722 novel transcript -0.0563
58498 ENSG00000285720 Putative protein FAM90A16P/FAM90A17P -0.0563
58497 ENSG00000285719 novel transcript, antisense to CD34 -0.0563
58496 ENSG00000285718 novel transcript -0.0563
58495 ENSG00000285717 novel transcript -0.0563
58494 ENSG00000285716 novel transcript -0.0563
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 39.9501

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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