Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1160115

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160115


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7010000000000000000000-769Sequence Read ArchiveSRP018525SRP018525_T19Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptomeTwo-pronuclear zygoteHumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 113.9521
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 96.1371
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 81.6804
4 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 55.2368
5 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 51.9405
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 48.5710
7 ENSG00000087086 FTL ferritin light chain 46.6715
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 46.6587
9 ENSG00000261812 TUBB8P7 tubulin beta 8 class VIII pseudogene 7 32.4461
10 ENSG00000160505 NLRP4 NLR family pyrin domain containing 4 31.5656

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285699 novel transcript -0.0628
58502 ENSG00000285698 Novel transcript -0.0628
58501 ENSG00000285697 chromosome 22 open reading frame 42 (C22orf42) pseudogene -0.0628
58500 ENSG00000285693 Novel transcript -0.0628
58499 ENSG00000285691 novel transcript, antisense to TRDN -0.0628
58498 ENSG00000285690 G protein-coupled receptor kinase 3 (GRK3) pseudogene -0.0628
58497 ENSG00000285689 novel transcript -0.0628
58496 ENSG00000285688 novel transcript -0.0628
58495 ENSG00000285687 Putative protein FAM90A22P -0.0628
58494 ENSG00000285686 LINC02834 long intergenic non-protein coding RNA 2834 -0.0628

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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