Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1160116

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160116


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7010000000000000000000-769Sequence Read ArchiveSRP018525SRP018525_T20Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptomeTwo-pronuclear zygoteHumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 116.3813
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 113.2606
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 77.7039
4 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 63.2798
5 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 58.5821
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 50.5868
7 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 40.0028
8 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S rRNA 38.9450
9 ENSG00000087086 FTL ferritin light chain 33.0537
10 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 25.1405

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285701 novel transcript, antisense to CTNNBIP1 -0.0651
58502 ENSG00000285700 novel transcript -0.0651
58501 ENSG00000285698 Novel transcript -0.0651
58500 ENSG00000285694 novel transcript -0.0651
58499 ENSG00000285693 Novel transcript -0.0651
58498 ENSG00000285691 novel transcript, antisense to TRDN -0.0651
58497 ENSG00000285690 G protein-coupled receptor kinase 3 (GRK3) pseudogene -0.0651
58496 ENSG00000285689 novel transcript -0.0651
58495 ENSG00000285688 novel transcript -0.0651
58494 ENSG00000285687 Putative protein FAM90A22P -0.0651

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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