Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1160117

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160117


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7010000000000000000000-769Sequence Read ArchiveSRP018525SRP018525_T21Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptomeTwo-pronuclear zygoteHumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000087086 FTL ferritin light chain 80.1097
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 71.7431
3 ENSG00000261812 TUBB8P7 tubulin beta 8 class VIII pseudogene 7 57.7727
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 56.9389
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 56.8529
6 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 54.0536
7 ENSG00000178804 H1-8 H1.8 linker histone 46.1471
8 ENSG00000160505 NLRP4 NLR family pyrin domain containing 4 44.2166
9 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 40.5327
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 38.0121

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285688 novel transcript -0.0928
58502 ENSG00000285687 Putative protein FAM90A22P -0.0928
58501 ENSG00000285686 LINC02834 long intergenic non-protein coding RNA 2834 -0.0928
58500 ENSG00000285685 Novel trancript -0.0928
58499 ENSG00000285683 Novel transcript -0.0928
58498 ENSG00000285680 novel transcript, antisense to SLITRK1 -0.0928
58497 ENSG00000285675 novel transcript -0.0928
58496 ENSG00000285674 NA -0.0928
58495 ENSG00000285672 novel transcript -0.0928
58494 ENSG00000285671 novel transcript -0.0928

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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