Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1160117
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1160117
Profile download
7010000000000000000000-769
Sequence Read Archive
SRP018525
SRP018525_T21
Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-Sequencing
Transcriptome
Two-pronuclear zygote
Human
Early embryonic tissue
RNA-seq
HiSeq 2000
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000087086
FTL
ferritin light chain
80.1097
2
ENSG00000198886
MT-ND4
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4
71.7431
3
ENSG00000261812
TUBB8P7
tubulin beta 8 class VIII pseudogene 7
57.7727
4
ENSG00000198804
MT-CO1
mitochondrially encoded cytochrome c oxidase I
56.9389
5
ENSG00000210082
MT-RNR2
mitochondrially encoded 16S rRNA
56.8529
6
ENSG00000198763
MT-ND2
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2
54.0536
7
ENSG00000178804
H1-8
H1.8 linker histone
46.1471
8
ENSG00000160505
NLRP4
NLR family pyrin domain containing 4
44.2166
9
ENSG00000198888
MT-ND1
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1
40.5327
10
ENSG00000198712
MT-CO2
mitochondrially encoded cytochrome c oxidase II
38.0121
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285688
novel transcript
-0.0928
58502
ENSG00000285687
Putative protein FAM90A22P
-0.0928
58501
ENSG00000285686
LINC02834
long intergenic non-protein coding RNA 2834
-0.0928
58500
ENSG00000285685
Novel trancript
-0.0928
58499
ENSG00000285683
Novel transcript
-0.0928
58498
ENSG00000285680
novel transcript, antisense to SLITRK1
-0.0928
58497
ENSG00000285675
novel transcript
-0.0928
58496
ENSG00000285674
NA
-0.0928
58495
ENSG00000285672
novel transcript
-0.0928
58494
ENSG00000285671
novel transcript
-0.0928
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
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