Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1160118

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160118


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7010000000000000000000-769Sequence Read ArchiveSRP018525SRP018525_T22Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptomeZygote (Zygote)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 129.0154
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 93.5527
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 73.5807
4 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 61.8601
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 48.5993
6 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 44.0788
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 42.9078
8 ENSG00000214102 WEE2 WEE2 oocyte meiosis inhibiting kinase 34.9690
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 32.9932
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 30.0522

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285691 novel transcript, antisense to TRDN -0.0688
58502 ENSG00000285690 G protein-coupled receptor kinase 3 (GRK3) pseudogene -0.0688
58501 ENSG00000285689 novel transcript -0.0688
58500 ENSG00000285688 novel transcript -0.0688
58499 ENSG00000285687 Putative protein FAM90A22P -0.0688
58498 ENSG00000285686 LINC02834 long intergenic non-protein coding RNA 2834 -0.0688
58497 ENSG00000285685 Novel trancript -0.0688
58496 ENSG00000285683 Novel transcript -0.0688
58495 ENSG00000285681 novel transcript, antisense to MC4R -0.0688
58494 ENSG00000285680 novel transcript, antisense to SLITRK1 -0.0688

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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