Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1160119
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1160119
Profile download
7010000000000000000000-769
Sequence Read Archive
SRP018525
SRP018525_T23
Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-Sequencing
Transcriptome
Zygote (Zygote)
Human
Early embryonic tissue
RNA-seq
HiSeq 2000
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000198886
MT-ND4
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4
129.6196
2
ENSG00000198804
MT-CO1
mitochondrially encoded cytochrome c oxidase I
107.2757
3
ENSG00000198888
MT-ND1
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1
60.4627
4
ENSG00000198763
MT-ND2
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2
55.7417
5
ENSG00000198712
MT-CO2
mitochondrially encoded cytochrome c oxidase II
53.8927
6
ENSG00000210082
MT-RNR2
mitochondrially encoded 16S rRNA
52.3930
7
ENSG00000198727
MT-CYB
mitochondrially encoded cytochrome b
51.4318
8
ENSG00000198938
MT-CO3
mitochondrially encoded cytochrome c oxidase III
45.2717
9
ENSG00000164611
PTTG1
PTTG1 regulator of sister chromatid separation, securin
41.7648
10
ENSG00000211459
MT-RNR1
mitochondrially encoded 12S rRNA
32.9967
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285707
novel transcript
-0.0495
58502
ENSG00000285706
Novel transcript
-0.0495
58501
ENSG00000285705
novel transcript
-0.0495
58500
ENSG00000285703
novel transcript
-0.0495
58499
ENSG00000285702
novel transcript
-0.0495
58498
ENSG00000285701
novel transcript, antisense to CTNNBIP1
-0.0495
58497
ENSG00000285700
novel transcript
-0.0495
58496
ENSG00000285699
novel transcript
-0.0495
58495
ENSG00000285698
Novel transcript
-0.0495
58494
ENSG00000285697
chromosome 22 open reading frame 42 (C22orf42) pseudogene
-0.0495
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
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