SHOGoiN Cell Transcriptome: GSM1160121

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160121


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7010000000000000000000-770Sequence Read ArchiveSRP018525SRP018525_T25Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome2-cell embryo cell (2-cell embryo)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 132.1416
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 104.1135
3 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 66.3324
4 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 58.3120
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 51.0625
6 ENSG00000164611 PTTG1 PTTG1 regulator of sister chromatid separation, securin 50.0542
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 47.9594
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 41.1651
9 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 40.6115
10 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 38.7881

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58502 ENSG00000285720 Putative protein FAM90A16P/FAM90A17P -0.0456
58501 ENSG00000285719 novel transcript, antisense to CD34 -0.0456
58500 ENSG00000285718 novel transcript -0.0456
58499 ENSG00000285717 novel transcript -0.0456
58498 ENSG00000285716 novel transcript -0.0456
58497 ENSG00000285715 novel transcript, antisense to TACC2 -0.0456
58496 ENSG00000285714 novel transcript -0.0456
58495 ENSG00000285713 novel transcript -0.0456
58494 ENSG00000285712 novel transcript -0.0456
10 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 38.7881

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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