Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1160124

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160124


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7010000000000000000000-771Sequence Read ArchiveSRP018525SRP018525_T28Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome4-cell embryo cell (4-cell embryo)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 150.0971
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 118.3235
3 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 73.0806
4 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 53.6667
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 52.1913
6 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 48.8459
7 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 45.2475
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 44.8925
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 40.4641
10 ENSG00000198695 MT-ND6 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6 29.2221

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285726 novel transcript -0.0247
58502 ENSG00000285725 novel transcript -0.0247
58501 ENSG00000285724 novel transcript -0.0247
58500 ENSG00000285723 novel protein -0.0247
58499 ENSG00000285722 novel transcript -0.0247
58497 ENSG00000285720 Putative protein FAM90A16P/FAM90A17P -0.0247
58496 ENSG00000285719 novel transcript, antisense to CD34 -0.0247
58495 ENSG00000285718 novel transcript -0.0247
58494 ENSG00000285717 novel transcript -0.0247
10 ENSG00000198695 MT-ND6 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6 29.2221

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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