SHOGoiN Cell Transcriptome: GSM1160125
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1160125 Profile download | 7010000000000000000000-771 | Sequence Read Archive | SRP018525 | SRP018525_T29 | Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-Sequencing | Transcriptome | 4-cell embryo cell (4-cell embryo) | Human | Early embryonic tissue | RNA-seq | HiSeq 2000 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSG00000198886 | MT-ND4 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 | 144.3188 |
| 2 | ENSG00000198804 | MT-CO1 | mitochondrially encoded cytochrome c oxidase I | 124.2073 |
| 3 | ENSG00000198899 | MT-ATP6 | mitochondrially encoded ATP synthase membrane subunit 6 | 59.2331 |
| 4 | ENSG00000198712 | MT-CO2 | mitochondrially encoded cytochrome c oxidase II | 58.8450 |
| 5 | ENSG00000198763 | MT-ND2 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 | 55.5488 |
| 6 | ENSG00000198727 | MT-CYB | mitochondrially encoded cytochrome b | 55.1157 |
| 7 | ENSG00000198938 | MT-CO3 | mitochondrially encoded cytochrome c oxidase III | 50.8702 |
| 8 | ENSG00000198888 | MT-ND1 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 | 48.2181 |
| 9 | ENSG00000198695 | MT-ND6 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6 | 32.4882 |
| 10 | ENSG00000210082 | MT-RNR2 | mitochondrially encoded 16S rRNA | 32.1997 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 58503 | ENSG00000285743 | novel transcript, LINP1-LINC00707 readthrough | -0.0202 | |
| 58502 | ENSG00000285742 | novel transcript | -0.0202 | |
| 58501 | ENSG00000285741 | novel transcript | -0.0202 | |
| 58500 | ENSG00000285740 | novel transcript | -0.0202 | |
| 58499 | ENSG00000285739 | novel transcript, antisense to NRG3 | -0.0202 | |
| 58498 | ENSG00000285738 | Novel transcript | -0.0202 | |
| 58497 | ENSG00000285737 | LINC02680 | long intergenic non-protein coding RNA 2680 | -0.0202 |
| 58496 | ENSG00000285736 | Novel transcript | -0.0202 | |
| 58495 | ENSG00000285735 | LINC02717 | long intergenic non-protein coding RNA 2717 | -0.0202 |
| 58494 | ENSG00000285734 | novel transcript, antisense to CACNA1C | -0.0202 |
