SHOGoiN Cell Transcriptome: GSM1160125

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160125


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7010000000000000000000-771Sequence Read ArchiveSRP018525SRP018525_T29Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome4-cell embryo cell (4-cell embryo)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 144.3188
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 124.2073
3 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 59.2331
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 58.8450
5 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 55.5488
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 55.1157
7 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 50.8702
8 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 48.2181
9 ENSG00000198695 MT-ND6 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6 32.4882
10 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 32.1997

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0202
58502 ENSG00000285742 novel transcript -0.0202
58501 ENSG00000285741 novel transcript -0.0202
58500 ENSG00000285740 novel transcript -0.0202
58499 ENSG00000285739 novel transcript, antisense to NRG3 -0.0202
58498 ENSG00000285738 Novel transcript -0.0202
58497 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0202
58496 ENSG00000285736 Novel transcript -0.0202
58495 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0202
58494 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0202

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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