Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1160126

Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1160126 Profile download	7010000000000000000000-772	Sequence Read Archive	SRP018525	SRP018525_T30	Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-Sequencing	Transcriptome	8-cell embryo cell (8-cell embryo)	Human	Early embryonic tissue	RNA-seq	HiSeq 2000	Sequence

Histogram (Expression count)

Top 10 up-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
1	ENSG00000198886	MT-ND4	mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4	149.4812
2	ENSG00000198804	MT-CO1	mitochondrially encoded cytochrome c oxidase I	129.4296
3	ENSG00000198763	MT-ND2	mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2	62.1009
4	ENSG00000198727	MT-CYB	mitochondrially encoded cytochrome b	54.1690
5	ENSG00000198712	MT-CO2	mitochondrially encoded cytochrome c oxidase II	53.3666
6	ENSG00000198888	MT-ND1	mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1	47.4056
7	ENSG00000198899	MT-ATP6	mitochondrially encoded ATP synthase membrane subunit 6	41.7541
8	ENSG00000198938	MT-CO3	mitochondrially encoded cytochrome c oxidase III	40.2588
9	ENSG00000210082	MT-RNR2	mitochondrially encoded 16S rRNA	37.2294
10	ENSG00000198786	MT-ND5	mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5	23.0854

Bottom 10 down-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
58503	ENSG00000285723		novel protein	-0.0269
58502	ENSG00000285722		novel transcript	-0.0269
58500	ENSG00000285720		Putative protein FAM90A16P/FAM90A17P	-0.0269
58499	ENSG00000285719		novel transcript, antisense to CD34	-0.0269
58498	ENSG00000285718		novel transcript	-0.0269
58497	ENSG00000285717		novel transcript	-0.0269
58496	ENSG00000285716		novel transcript	-0.0269
58495	ENSG00000285715		novel transcript, antisense to TACC2	-0.0269
58494	ENSG00000285714		novel transcript	-0.0269
10	ENSG00000198786	MT-ND5	mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5	23.0854

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	Z-score

Now loading...