Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1160130

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160130


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7010000000000000000000-772Sequence Read ArchiveSRP018525SRP018525_T34Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome8-cell embryo cell (8-cell embryo)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 135.0682
2 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 63.7112
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 58.7524
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 53.5228
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 50.7208
6 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 49.8983
7 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 49.2355
8 ENSG00000142534 RPS11 ribosomal protein S11 39.1524
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 34.5022
10 ENSG00000108107 RPL28 ribosomal protein L28 33.3719

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0628
58502 ENSG00000285736 Novel transcript -0.0628
58501 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0628
58500 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0628
58499 ENSG00000285733 novel protein -0.0628
58498 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0628
58497 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0628
58496 ENSG00000285730 novel transcript -0.0628
58495 ENSG00000285729 novel transcript -0.0628
58494 ENSG00000285727 novel transcript -0.0628

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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