SHOGoiN Cell Transcriptome: GSM1160131

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


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7010000000000000000000-772Sequence Read ArchiveSRP018525SRP018525_T35Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome8-cell embryo cell (8-cell embryo)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 126.3340
2 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 64.5619
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 59.6138
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 49.5694
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 46.0768
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 45.1180
7 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 40.4091
8 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 35.8280
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 33.7295
10 ENSG00000137154 RPS6 ribosomal protein S6 32.9517

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0905
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0905
58733 ENSG00000285992 novel transcript -0.0905
58732 ENSG00000285991 novel transcript -0.0905
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0905
58730 ENSG00000285989 TEC -0.0905
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0905
58728 ENSG00000285987 NA -0.0905
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0905
58726 ENSG00000285985 NA -0.0905

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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