Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1160131

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160131


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7010000000000000000000-772Sequence Read ArchiveSRP018525SRP018525_T35Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome8-cell embryo cell (8-cell embryo)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 126.3340
2 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 64.5619
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 59.6138
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 49.5694
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 46.0768
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 45.1180
7 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 40.4091
8 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S rRNA 35.8280
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 33.7295
10 ENSG00000137154 RPS6 ribosomal protein S6 32.9517

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285724 novel transcript -0.0905
58502 ENSG00000285723 novel protein -0.0905
58501 ENSG00000285722 novel transcript -0.0905
58499 ENSG00000285720 Putative protein FAM90A16P/FAM90A17P -0.0905
58498 ENSG00000285719 novel transcript, antisense to CD34 -0.0905
58497 ENSG00000285718 novel transcript -0.0905
58496 ENSG00000285717 novel transcript -0.0905
58495 ENSG00000285716 novel transcript -0.0905
58494 ENSG00000285715 novel transcript, antisense to TACC2 -0.0905
10 ENSG00000137154 RPS6 ribosomal protein S6 32.9517

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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