Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1160132
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1160132
Profile download
7010000000000000000000-772
Sequence Read Archive
SRP018525
SRP018525_T36
Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-Sequencing
Transcriptome
8-cell embryo cell (8-cell embryo)
Human
Early embryonic tissue
RNA-seq
HiSeq 2000
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000133112
TPT1
tumor protein, translationally-controlled 1
102.6489
2
ENSG00000198886
MT-ND4
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4
86.9049
3
ENSG00000273149
novel transcript, antisense to TPT1
49.8675
4
ENSG00000083845
RPS5
ribosomal protein S5
44.8817
5
ENSG00000198888
MT-ND1
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1
41.4838
6
ENSG00000198712
MT-CO2
mitochondrially encoded cytochrome c oxidase II
41.3595
7
ENSG00000210082
MT-RNR2
mitochondrially encoded 16S rRNA
38.3446
8
ENSG00000089157
RPLP0
ribosomal protein lateral stalk subunit P0
38.3407
9
ENSG00000198727
MT-CYB
mitochondrially encoded cytochrome b
37.7304
10
ENSG00000142534
RPS11
ribosomal protein S11
33.5559
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285732
novel transcript, antisense to ABCD2
-0.0866
58502
ENSG00000285731
Novel transcript, antisense to TBC1D5
-0.0866
58501
ENSG00000285730
novel transcript
-0.0866
58500
ENSG00000285729
novel transcript
-0.0866
58499
ENSG00000285727
novel transcript
-0.0866
58498
ENSG00000285726
novel transcript
-0.0866
58497
ENSG00000285725
novel transcript
-0.0866
58496
ENSG00000285724
novel transcript
-0.0866
58495
ENSG00000285723
novel protein
-0.0866
58494
ENSG00000285722
novel transcript
-0.0866
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
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