Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1160133

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160133


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7010000000000000000000-772Sequence Read ArchiveSRP018525SRP018525_T37Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome8-cell embryo cell (8-cell embryo)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 115.5835
2 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 88.4635
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 50.7303
4 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 49.5870
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 48.0265
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 43.0430
7 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 42.2840
8 ENSG00000273149 novel transcript, antisense to TPT1 41.3410
9 ENSG00000203909 DPPA5 developmental pluripotency associated 5 34.2384
10 ENSG00000083845 RPS5 ribosomal protein S5 33.3475

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285726 novel transcript -0.0840
58502 ENSG00000285725 novel transcript -0.0840
58501 ENSG00000285724 novel transcript -0.0840
58500 ENSG00000285723 novel protein -0.0840
58499 ENSG00000285722 novel transcript -0.0840
58497 ENSG00000285720 Putative protein FAM90A16P/FAM90A17P -0.0840
58496 ENSG00000285719 novel transcript, antisense to CD34 -0.0840
58495 ENSG00000285718 novel transcript -0.0840
58494 ENSG00000285717 novel transcript -0.0840
10 ENSG00000083845 RPS5 ribosomal protein S5 33.3475

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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