Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1160134

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160134


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7010000000000000000000-772Sequence Read ArchiveSRP018525SRP018525_T38Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome8-cell embryo cell (8-cell embryo)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 133.1376
2 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 75.4666
3 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 66.4245
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 63.8954
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 55.9276
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 51.0450
7 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 47.2909
8 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 42.5770
9 ENSG00000273149 novel transcript, antisense to TPT1 39.2714
10 ENSG00000203909 DPPA5 developmental pluripotency associated 5 28.8331

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285724 novel transcript -0.0649
58502 ENSG00000285723 novel protein -0.0649
58501 ENSG00000285722 novel transcript -0.0649
58499 ENSG00000285720 Putative protein FAM90A16P/FAM90A17P -0.0649
58498 ENSG00000285719 novel transcript, antisense to CD34 -0.0649
58497 ENSG00000285718 novel transcript -0.0649
58496 ENSG00000285717 novel transcript -0.0649
58495 ENSG00000285716 novel transcript -0.0649
58494 ENSG00000285715 novel transcript, antisense to TACC2 -0.0649
10 ENSG00000203909 DPPA5 developmental pluripotency associated 5 28.8331

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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