SHOGoiN Cell Transcriptome: GSM1160135

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160135


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7010000000000000000000-772Sequence Read ArchiveSRP018525SRP018525_T39Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome8-cell embryo cell (8-cell embryo)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 135.0981
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 82.2906
3 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 79.2578
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 65.4992
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 61.3536
6 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 44.3166
7 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 39.8331
8 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 38.4768
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 32.0811
10 ENSG00000112306 RPS12 ribosomal protein S12 29.6409

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285726 novel transcript -0.0553
58502 ENSG00000285725 novel transcript -0.0553
58501 ENSG00000285724 novel transcript -0.0553
58500 ENSG00000285723 novel protein -0.0553
58499 ENSG00000285722 novel transcript -0.0553
58497 ENSG00000285720 Putative protein FAM90A16P/FAM90A17P -0.0553
58496 ENSG00000285719 novel transcript, antisense to CD34 -0.0553
58495 ENSG00000285718 novel transcript -0.0553
58494 ENSG00000285717 novel transcript -0.0553
10 ENSG00000112306 RPS12 ribosomal protein S12 29.6409

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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