SHOGoiN Cell Transcriptome: GSM1160136
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1160136 Profile download | 7010000000000000000000-772 | Sequence Read Archive | SRP018525 | SRP018525_T40 | Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-Sequencing | Transcriptome | 8-cell embryo cell (8-cell embryo) | Human | Early embryonic tissue | RNA-seq | HiSeq 2000 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSG00000198886 | MT-ND4 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 | 168.1166 |
| 2 | ENSG00000198888 | MT-ND1 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 | 83.4778 |
| 3 | ENSG00000198804 | MT-CO1 | mitochondrially encoded cytochrome c oxidase I | 70.4974 |
| 4 | ENSG00000198727 | MT-CYB | mitochondrially encoded cytochrome b | 62.4696 |
| 5 | ENSG00000198712 | MT-CO2 | mitochondrially encoded cytochrome c oxidase II | 58.4227 |
| 6 | ENSG00000210082 | MT-RNR2 | mitochondrially encoded 16S RNA | 34.8446 |
| 7 | ENSG00000198763 | MT-ND2 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 | 27.0676 |
| 8 | ENSG00000112306 | RPS12 | ribosomal protein S12 | 26.2733 |
| 9 | ENSG00000198786 | MT-ND5 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 | 22.3488 |
| 10 | ENSG00000198938 | MT-CO3 | mitochondrially encoded cytochrome c oxidase III | 20.2492 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 58735 | ENSG00000285994 | novel transcript, sense intronic to CAMK1D | -0.0415 | |
| 58734 | ENSG00000285993 | novel transcript, antisense to RNF165 | -0.0415 | |
| 58733 | ENSG00000285992 | novel transcript | -0.0415 | |
| 58732 | ENSG00000285991 | novel transcript | -0.0415 | |
| 58731 | ENSG00000285990 | neurobeachin (NBEA) pseudogene | -0.0415 | |
| 58730 | ENSG00000285989 | TEC | -0.0415 | |
| 58729 | ENSG00000285988 | novel transcript, LINP1-LINC00707 readthrough | -0.0415 | |
| 58728 | ENSG00000285987 | NA | -0.0415 | |
| 58727 | ENSG00000285986 | complement factor H related 3 (CFHR3) pseudogene | -0.0415 | |
| 58726 | ENSG00000285985 | NA | -0.0415 |
