Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1160136
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1160136
Profile download
7010000000000000000000-772
Sequence Read Archive
SRP018525
SRP018525_T40
Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-Sequencing
Transcriptome
8-cell embryo cell (8-cell embryo)
Human
Early embryonic tissue
RNA-seq
HiSeq 2000
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000198886
MT-ND4
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4
168.1166
2
ENSG00000198888
MT-ND1
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1
83.4778
3
ENSG00000198804
MT-CO1
mitochondrially encoded cytochrome c oxidase I
70.4974
4
ENSG00000198727
MT-CYB
mitochondrially encoded cytochrome b
62.4696
5
ENSG00000198712
MT-CO2
mitochondrially encoded cytochrome c oxidase II
58.4227
6
ENSG00000210082
MT-RNR2
mitochondrially encoded 16S rRNA
34.8446
7
ENSG00000198763
MT-ND2
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2
27.0676
8
ENSG00000112306
RPS12
ribosomal protein S12
26.2733
9
ENSG00000198786
MT-ND5
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5
22.3488
10
ENSG00000198938
MT-CO3
mitochondrially encoded cytochrome c oxidase III
20.2492
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285736
Novel transcript
-0.0415
58502
ENSG00000285735
LINC02717
long intergenic non-protein coding RNA 2717
-0.0415
58501
ENSG00000285734
novel transcript, antisense to CACNA1C
-0.0415
58500
ENSG00000285733
novel protein
-0.0415
58499
ENSG00000285732
novel transcript, antisense to ABCD2
-0.0415
58498
ENSG00000285731
Novel transcript, antisense to TBC1D5
-0.0415
58497
ENSG00000285730
novel transcript
-0.0415
58496
ENSG00000285729
novel transcript
-0.0415
58495
ENSG00000285728
novel transcript, antisense to PPIH
-0.0415
58494
ENSG00000285727
novel transcript
-0.0415
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
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