Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1160136

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160136


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7010000000000000000000-772Sequence Read ArchiveSRP018525SRP018525_T40Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome8-cell embryo cell (8-cell embryo)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 168.1166
2 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 83.4778
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 70.4974
4 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 62.4696
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 58.4227
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 34.8446
7 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 27.0676
8 ENSG00000112306 RPS12 ribosomal protein S12 26.2733
9 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 22.3488
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 20.2492

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285736 Novel transcript -0.0415
58502 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0415
58501 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0415
58500 ENSG00000285733 novel protein -0.0415
58499 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0415
58498 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0415
58497 ENSG00000285730 novel transcript -0.0415
58496 ENSG00000285729 novel transcript -0.0415
58495 ENSG00000285728 novel transcript, antisense to PPIH -0.0415
58494 ENSG00000285727 novel transcript -0.0415

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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