SHOGoiN Cell Transcriptome: GSM1160136
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1160136 Profile download | 7010000000000000000000-772 | Sequence Read Archive | SRP018525 | SRP018525_T40 | Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-Sequencing | Transcriptome | 8-cell embryo cell (8-cell embryo) | Human | Early embryonic tissue | RNA-seq | HiSeq 2000 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSG00000198886 | MT-ND4 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 | 168.1166 |
| 2 | ENSG00000198888 | MT-ND1 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 | 83.4778 |
| 3 | ENSG00000198804 | MT-CO1 | mitochondrially encoded cytochrome c oxidase I | 70.4974 |
| 4 | ENSG00000198727 | MT-CYB | mitochondrially encoded cytochrome b | 62.4696 |
| 5 | ENSG00000198712 | MT-CO2 | mitochondrially encoded cytochrome c oxidase II | 58.4227 |
| 6 | ENSG00000210082 | MT-RNR2 | mitochondrially encoded 16S rRNA | 34.8446 |
| 7 | ENSG00000198763 | MT-ND2 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 | 27.0676 |
| 8 | ENSG00000112306 | RPS12 | ribosomal protein S12 | 26.2733 |
| 9 | ENSG00000198786 | MT-ND5 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 | 22.3488 |
| 10 | ENSG00000198938 | MT-CO3 | mitochondrially encoded cytochrome c oxidase III | 20.2492 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 58503 | ENSG00000285736 | Novel transcript | -0.0415 | |
| 58502 | ENSG00000285735 | LINC02717 | long intergenic non-protein coding RNA 2717 | -0.0415 |
| 58501 | ENSG00000285734 | novel transcript, antisense to CACNA1C | -0.0415 | |
| 58500 | ENSG00000285733 | novel protein | -0.0415 | |
| 58499 | ENSG00000285732 | novel transcript, antisense to ABCD2 | -0.0415 | |
| 58498 | ENSG00000285731 | Novel transcript, antisense to TBC1D5 | -0.0415 | |
| 58497 | ENSG00000285730 | novel transcript | -0.0415 | |
| 58496 | ENSG00000285729 | novel transcript | -0.0415 | |
| 58495 | ENSG00000285728 | novel transcript, antisense to PPIH | -0.0415 | |
| 58494 | ENSG00000285727 | novel transcript | -0.0415 |
