Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1160137

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160137


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7010000000000000000000-772Sequence Read ArchiveSRP018525SRP018525_T41Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome8-cell embryo cell (8-cell embryo)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 159.8100
2 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 77.0502
3 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 71.6293
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 59.9068
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 58.1594
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 54.4338
7 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 52.2240
8 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 32.1349
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 28.2283
10 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 23.0668

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285702 novel transcript -0.0489
58502 ENSG00000285701 novel transcript, antisense to CTNNBIP1 -0.0489
58501 ENSG00000285700 novel transcript -0.0489
58500 ENSG00000285699 novel transcript -0.0489
58499 ENSG00000285698 Novel transcript -0.0489
58498 ENSG00000285697 chromosome 22 open reading frame 42 (C22orf42) pseudogene -0.0489
58497 ENSG00000285694 novel transcript -0.0489
58496 ENSG00000285693 Novel transcript -0.0489
58495 ENSG00000285691 novel transcript, antisense to TRDN -0.0489
58494 ENSG00000285690 G protein-coupled receptor kinase 3 (GRK3) pseudogene -0.0489

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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