Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1160139
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1160139
Profile download
7010000000000000000000-773
Sequence Read Archive
SRP018525
SRP018525_T43
Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-Sequencing
Transcriptome
Morula cell (Morula)
Human
Early embryonic tissue
RNA-seq
HiSeq 2000
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000198886
MT-ND4
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4
155.9943
2
ENSG00000198712
MT-CO2
mitochondrially encoded cytochrome c oxidase II
102.5561
3
ENSG00000198763
MT-ND2
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2
73.6438
4
ENSG00000198804
MT-CO1
mitochondrially encoded cytochrome c oxidase I
61.9432
5
ENSG00000198899
MT-ATP6
mitochondrially encoded ATP synthase membrane subunit 6
60.1563
6
ENSG00000198888
MT-ND1
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1
55.9457
7
ENSG00000198727
MT-CYB
mitochondrially encoded cytochrome b
47.0354
8
ENSG00000198938
MT-CO3
mitochondrially encoded cytochrome c oxidase III
41.9286
9
ENSG00000210082
MT-RNR2
mitochondrially encoded 16S rRNA
21.4624
10
ENSG00000248527
MTATP6P1
MT-ATP6 pseudogene 1
16.0275
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285709
Novel transcript
-0.0335
58502
ENSG00000285708
novel protein
-0.0335
58501
ENSG00000285707
novel transcript
-0.0335
58500
ENSG00000285705
novel transcript
-0.0335
58499
ENSG00000285704
novel transcript, antisense to WNK1
-0.0335
58498
ENSG00000285703
novel transcript
-0.0335
58497
ENSG00000285702
novel transcript
-0.0335
58496
ENSG00000285701
novel transcript, antisense to CTNNBIP1
-0.0335
58495
ENSG00000285700
novel transcript
-0.0335
58494
ENSG00000285699
novel transcript
-0.0335
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
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