SHOGoiN Cell Transcriptome: GSM1268960
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1268960 Profile download | 6000003010000000000000-738 | Sequence Read Archive | SRP033135 | SRP033135_T1 | Pseudo-temporal ordering of individual cells reveals regulators of differentiation | Transcriptome | Myoblast_T0 (Skeletal muscle) | Human | Muscle | RNA-seq | HiSeq 2500 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSG00000115414 | FN1 | fibronectin 1 | 150.0633 |
| 2 | ENSG00000210082 | MT-RNR2 | mitochondrially encoded 16S rRNA | 77.4752 |
| 3 | ENSG00000198804 | MT-CO1 | mitochondrially encoded cytochrome c oxidase I | 69.1664 |
| 4 | ENSG00000198712 | MT-CO2 | mitochondrially encoded cytochrome c oxidase II | 43.0885 |
| 5 | ENSG00000251562 | MALAT1 | metastasis associated lung adenocarcinoma transcript 1 | 41.5945 |
| 6 | ENSG00000156508 | EEF1A1 | eukaryotic translation elongation factor 1 alpha 1 | 41.2815 |
| 7 | ENSG00000182718 | ANXA2 | annexin A2 | 39.3268 |
| 8 | ENSG00000075624 | ACTB | actin beta | 30.1736 |
| 9 | ENSG00000120708 | TGFBI | transforming growth factor beta induced | 29.2406 |
| 10 | ENSG00000125148 | MT2A | metallothionein 2A | 28.9571 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 58503 | ENSG00000285731 | Novel transcript, antisense to TBC1D5 | -0.0793 | |
| 58502 | ENSG00000285730 | novel transcript | -0.0793 | |
| 58501 | ENSG00000285729 | novel transcript | -0.0793 | |
| 58500 | ENSG00000285727 | novel transcript | -0.0793 | |
| 58499 | ENSG00000285726 | novel transcript | -0.0793 | |
| 58498 | ENSG00000285725 | novel transcript | -0.0793 | |
| 58497 | ENSG00000285724 | novel transcript | -0.0793 | |
| 58496 | ENSG00000285723 | novel protein | -0.0793 | |
| 58495 | ENSG00000285722 | novel transcript | -0.0793 | |
| 58494 | ENSG00000285720 | Putative protein FAM90A16P/FAM90A17P | -0.0793 |
