SHOGoiN Cell Transcriptome: GSM1268960

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268960


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T1Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 150.0633
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 77.4752
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 69.1664
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 43.0885
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 41.5945
6 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 41.2815
7 ENSG00000182718 ANXA2 annexin A2 39.3268
8 ENSG00000075624 ACTB actin beta 30.1736
9 ENSG00000120708 TGFBI transforming growth factor beta induced 29.2406
10 ENSG00000125148 MT2A metallothionein 2A 28.9571

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0793
58502 ENSG00000285730 novel transcript -0.0793
58501 ENSG00000285729 novel transcript -0.0793
58500 ENSG00000285727 novel transcript -0.0793
58499 ENSG00000285726 novel transcript -0.0793
58498 ENSG00000285725 novel transcript -0.0793
58497 ENSG00000285724 novel transcript -0.0793
58496 ENSG00000285723 novel protein -0.0793
58495 ENSG00000285722 novel transcript -0.0793
58494 ENSG00000285720 Putative protein FAM90A16P/FAM90A17P -0.0793

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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