SHOGoiN Cell Transcriptome: GSM1268969

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268969


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T9Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 105.0863
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 96.4611
3 ENSG00000075624 ACTB actin beta 46.4977
4 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 43.3633
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 42.0317
6 ENSG00000182718 ANXA2 annexin A2 40.8797
7 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 39.4060
8 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 38.9571
9 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 36.3763
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 35.7330

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285739 novel transcript, antisense to NRG3 -0.0995
58502 ENSG00000285738 Novel transcript -0.0995
58501 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0995
58500 ENSG00000285736 Novel transcript -0.0995
58499 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0995
58498 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0995
58497 ENSG00000285733 novel protein -0.0995
58496 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0995
58495 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0995
58494 ENSG00000285729 novel transcript -0.0995

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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