Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1268970

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268970


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T10Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 108.1129
2 ENSG00000182718 ANXA2 annexin A2 99.9081
3 ENSG00000075624 ACTB actin beta 58.2225
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 56.7490
5 ENSG00000131711 MAP1B microtubule associated protein 1B 56.1193
6 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 46.0351
7 ENSG00000118971 CCND2 cyclin D2 42.8037
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 33.7439
9 ENSG00000184009 ACTG1 actin gamma 1 33.3236
10 ENSG00000181163 NPM1 nucleophosmin 1 26.1400

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285747 novel transcript -0.0565
58502 ENSG00000285746 putative UPF0607 protein ENSP00000383144 -0.0565
58501 ENSG00000285745 general transcription factor IIH subunit 5 (GTF2H5) pseudogene -0.0565
58500 ENSG00000285744 novel transcript -0.0565
58499 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0565
58498 ENSG00000285742 novel transcript -0.0565
58497 ENSG00000285741 novel transcript -0.0565
58496 ENSG00000285740 novel transcript -0.0565
58495 ENSG00000285739 novel transcript, antisense to NRG3 -0.0565
58494 ENSG00000285738 Novel transcript -0.0565

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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