Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1268986

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268986


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T22Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 99.9257
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 92.3145
3 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 65.0404
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 59.6716
5 ENSG00000182718 ANXA2 annexin A2 57.3511
6 ENSG00000167601 AXL AXL receptor tyrosine kinase 43.9510
7 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 38.7140
8 ENSG00000115414 FN1 fibronectin 1 37.8445
9 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 35.9148
10 ENSG00000075624 ACTB actin beta 35.2749

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285730 novel transcript -0.0940
58502 ENSG00000285729 novel transcript -0.0940
58501 ENSG00000285727 novel transcript -0.0940
58500 ENSG00000285726 novel transcript -0.0940
58499 ENSG00000285725 novel transcript -0.0940
58498 ENSG00000285724 novel transcript -0.0940
58497 ENSG00000285723 novel protein -0.0940
58496 ENSG00000285722 novel transcript -0.0940
58494 ENSG00000285720 Putative protein FAM90A16P/FAM90A17P -0.0940
10 ENSG00000075624 ACTB actin beta 35.2749

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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