SHOGoiN Cell Transcriptome: GSM1268992

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268992


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T28Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 98.3400
2 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 82.9597
3 ENSG00000182718 ANXA2 annexin A2 67.4654
4 ENSG00000167601 AXL AXL receptor tyrosine kinase 49.1242
5 ENSG00000184009 ACTG1 actin gamma 1 42.6392
6 ENSG00000100316 RPL3 ribosomal protein L3 42.5427
7 ENSG00000125148 MT2A metallothionein 2A 40.3114
8 ENSG00000087086 FTL ferritin light chain 40.2360
9 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 37.9995
10 ENSG00000196230 TUBB tubulin beta class I 37.2592

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0653
58502 ENSG00000285742 novel transcript -0.0653
58501 ENSG00000285741 novel transcript -0.0653
58500 ENSG00000285740 novel transcript -0.0653
58499 ENSG00000285739 novel transcript, antisense to NRG3 -0.0653
58498 ENSG00000285738 Novel transcript -0.0653
58497 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0653
58496 ENSG00000285736 Novel transcript -0.0653
58495 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0653
58494 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0653

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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