SHOGoiN Cell Transcriptome: GSM1268999
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1268999 Profile download | 6000003010000000000000-738 | Sequence Read Archive | SRP033135 | SRP033135_T35 | Pseudo-temporal ordering of individual cells reveals regulators of differentiation | Transcriptome | Myoblast_T0 (Skeletal muscle) | Human | Muscle | RNA-seq | HiSeq 2500 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSG00000111640 | GAPDH | glyceraldehyde-3-phosphate dehydrogenase | 56.6196 |
| 2 | ENSG00000075624 | ACTB | actin beta | 37.7302 |
| 3 | ENSG00000102265 | TIMP1 | TIMP metallopeptidase inhibitor 1 | 37.7302 |
| 4 | ENSG00000258017 | novel transcript, antisense to TUBA1B | 37.7302 | |
| 5 | ENSG00000260032 | NORAD | non-coding RNA activated by DNA damage | 37.7302 |
| 6 | ENSG00000003756 | RBM5 | RNA binding motif protein 5 | 18.8408 |
| 7 | ENSG00000005022 | SLC25A5 | solute carrier family 25 member 5 | 18.8408 |
| 8 | ENSG00000021574 | SPAST | spastin | 18.8408 |
| 9 | ENSG00000023287 | RB1CC1 | RB1 inducible coiled-coil 1 | 18.8408 |
| 10 | ENSG00000023572 | GLRX2 | glutaredoxin 2 | 18.8408 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 58503 | ENSG00000285747 | novel transcript | -0.0486 | |
| 58502 | ENSG00000285746 | putative UPF0607 protein ENSP00000383144 | -0.0486 | |
| 58501 | ENSG00000285745 | general transcription factor IIH subunit 5 (GTF2H5) pseudogene | -0.0486 | |
| 58500 | ENSG00000285744 | novel transcript | -0.0486 | |
| 58499 | ENSG00000285743 | novel transcript, LINP1-LINC00707 readthrough | -0.0486 | |
| 58498 | ENSG00000285742 | novel transcript | -0.0486 | |
| 58497 | ENSG00000285741 | novel transcript | -0.0486 | |
| 58496 | ENSG00000285740 | novel transcript | -0.0486 | |
| 58495 | ENSG00000285739 | novel transcript, antisense to NRG3 | -0.0486 | |
| 58494 | ENSG00000285738 | Novel transcript | -0.0486 |
