Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1268999

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268999


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T35Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 56.6196
2 ENSG00000075624 ACTB actin beta 37.7302
3 ENSG00000102265 TIMP1 TIMP metallopeptidase inhibitor 1 37.7302
4 ENSG00000258017 novel transcript, antisense to TUBA1B 37.7302
5 ENSG00000260032 NORAD non-coding RNA activated by DNA damage 37.7302
6 ENSG00000003756 RBM5 RNA binding motif protein 5 18.8408
7 ENSG00000005022 SLC25A5 solute carrier family 25 member 5 18.8408
8 ENSG00000021574 SPAST spastin 18.8408
9 ENSG00000023287 RB1CC1 RB1 inducible coiled-coil 1 18.8408
10 ENSG00000023572 GLRX2 glutaredoxin 2 18.8408

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285747 novel transcript -0.0486
58502 ENSG00000285746 putative UPF0607 protein ENSP00000383144 -0.0486
58501 ENSG00000285745 general transcription factor IIH subunit 5 (GTF2H5) pseudogene -0.0486
58500 ENSG00000285744 novel transcript -0.0486
58499 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0486
58498 ENSG00000285742 novel transcript -0.0486
58497 ENSG00000285741 novel transcript -0.0486
58496 ENSG00000285740 novel transcript -0.0486
58495 ENSG00000285739 novel transcript, antisense to NRG3 -0.0486
58494 ENSG00000285738 Novel transcript -0.0486

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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