Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269004

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269004


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T40Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000102265 TIMP1 TIMP metallopeptidase inhibitor 1 88.8426
2 ENSG00000182718 ANXA2 annexin A2 86.6685
3 ENSG00000115414 FN1 fibronectin 1 86.3006
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 63.6901
5 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 51.0068
6 ENSG00000075624 ACTB actin beta 50.4649
7 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 50.2843
8 ENSG00000125148 MT2A metallothionein 2A 46.7121
9 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 42.3104
10 ENSG00000146197 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 41.4207

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285739 novel transcript, antisense to NRG3 -0.0809
58502 ENSG00000285738 Novel transcript -0.0809
58501 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0809
58500 ENSG00000285736 Novel transcript -0.0809
58499 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0809
58498 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0809
58497 ENSG00000285733 novel protein -0.0809
58496 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0809
58495 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0809
58494 ENSG00000285729 novel transcript -0.0809

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...