SHOGoiN Cell Transcriptome: GSM1269008

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269008


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T43Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 87.8114
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 85.7325
3 ENSG00000182718 ANXA2 annexin A2 78.2060
4 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 54.2545
5 ENSG00000075624 ACTB actin beta 48.8224
6 ENSG00000167601 AXL AXL receptor tyrosine kinase 48.5387
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 44.7987
8 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 38.6960
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 38.6496
10 ENSG00000184009 ACTG1 actin gamma 1 35.3687

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0970
58502 ENSG00000285733 novel protein -0.0970
58501 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0970
58500 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0970
58499 ENSG00000285730 novel transcript -0.0970
58498 ENSG00000285729 novel transcript -0.0970
58497 ENSG00000285727 novel transcript -0.0970
58496 ENSG00000285726 novel transcript -0.0970
58495 ENSG00000285725 novel transcript -0.0970
58494 ENSG00000285724 novel transcript -0.0970

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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