Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269020

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269020


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T54Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000182718 ANXA2 annexin A2 95.8727
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 81.1274
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 72.0167
4 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 43.3625
5 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 43.0565
6 ENSG00000075624 ACTB actin beta 42.8811
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 42.4568
8 ENSG00000167601 AXL AXL receptor tyrosine kinase 34.5986
9 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 32.1669
10 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S rRNA 31.9140

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285733 novel protein -0.1021
58502 ENSG00000285732 novel transcript, antisense to ABCD2 -0.1021
58501 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.1021
58500 ENSG00000285730 novel transcript -0.1021
58499 ENSG00000285729 novel transcript -0.1021
58498 ENSG00000285727 novel transcript -0.1021
58497 ENSG00000285726 novel transcript -0.1021
58496 ENSG00000285725 novel transcript -0.1021
58495 ENSG00000285724 novel transcript -0.1021
58494 ENSG00000285723 novel protein -0.1021

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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