SHOGoiN Cell Transcriptome: GSM1269027

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269027


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T61Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 236.3477
2 ENSG00000169045 HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 23.9240
3 ENSG00000115414 FN1 fibronectin 1 10.4140
4 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 9.6735
5 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 7.1333
6 ENSG00000182718 ANXA2 annexin A2 6.8485
7 ENSG00000137801 THBS1 thrombospondin 1 6.3928
8 ENSG00000079246 XRCC5 X-ray repair cross complementing 5 6.3701
9 ENSG00000116489 CAPZA1 capping actin protein of muscle Z-line subunit alpha 1 6.0853
10 ENSG00000159140 SON SON DNA binding protein 6.0169

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285745 general transcription factor IIH subunit 5 (GTF2H5) pseudogene -0.0318
58502 ENSG00000285744 novel transcript -0.0318
58501 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0318
58500 ENSG00000285742 novel transcript -0.0318
58499 ENSG00000285741 novel transcript -0.0318
58498 ENSG00000285740 novel transcript -0.0318
58497 ENSG00000285739 novel transcript, antisense to NRG3 -0.0318
58496 ENSG00000285738 Novel transcript -0.0318
58495 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0318
58494 ENSG00000285736 Novel transcript -0.0318

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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