SHOGoiN Cell Transcriptome: GSM1269030

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T63Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 100.1768
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 87.3444
3 ENSG00000075624 ACTB actin beta 63.3683
4 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 51.5344
5 ENSG00000167601 AXL AXL receptor tyrosine kinase 46.6604
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 44.9448
7 ENSG00000182718 ANXA2 annexin A2 42.9982
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 39.4249
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 36.0116
10 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S rRNA 34.6368

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285742 novel transcript -0.0887
58502 ENSG00000285741 novel transcript -0.0887
58501 ENSG00000285740 novel transcript -0.0887
58500 ENSG00000285739 novel transcript, antisense to NRG3 -0.0887
58499 ENSG00000285738 Novel transcript -0.0887
58498 ENSG00000285736 Novel transcript -0.0887
58497 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0887
58496 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0887
58495 ENSG00000285733 novel protein -0.0887
58494 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0887

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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