SHOGoiN Cell Transcriptome: GSM1269040

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269040


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T71Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 119.7507
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 107.8657
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 67.0787
4 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 62.0331
5 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 56.3880
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 44.3687
7 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 37.7020
8 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 31.0832
9 ENSG00000115414 FN1 fibronectin 1 31.0688
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 30.1336

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285742 novel transcript -0.0825
58502 ENSG00000285741 novel transcript -0.0825
58501 ENSG00000285740 novel transcript -0.0825
58500 ENSG00000285739 novel transcript, antisense to NRG3 -0.0825
58499 ENSG00000285738 Novel transcript -0.0825
58498 ENSG00000285736 Novel transcript -0.0825
58497 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0825
58496 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0825
58495 ENSG00000285733 novel protein -0.0825
58494 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0825

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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