Human Omics database for
the Generation of iPS and Normal Cells
Release notes
Statistics
Document manuals
FAQ
All Modules
Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1269041
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1269041
Profile download
6000003010000000000000-738
Sequence Read Archive
SRP033135
SRP033135_T72
Pseudo-temporal ordering of individual cells reveals regulators of differentiation
Transcriptome
Myoblast_T0 (Skeletal muscle)
Human
Muscle
RNA-seq
HiSeq 2500
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000110955
ATP5F1B
ATP synthase F1 subunit beta
37.3924
2
ENSG00000143933
CALM2
calmodulin 2
37.3924
3
ENSG00000167601
AXL
AXL receptor tyrosine kinase
37.3924
4
ENSG00000182718
ANXA2
annexin A2
37.3924
5
ENSG00000198763
MT-ND2
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2
37.3924
6
ENSG00000210082
MT-RNR2
mitochondrially encoded 16S rRNA
37.3924
7
ENSG00000007392
LUC7L
LUC7 like
18.6713
8
ENSG00000009307
CSDE1
cold shock domain containing E1
18.6713
9
ENSG00000010270
STARD3NL
STARD3 N-terminal like
18.6713
10
ENSG00000034510
TMSB10
thymosin beta 10
18.6713
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285747
novel transcript
-0.0497
58502
ENSG00000285746
putative UPF0607 protein ENSP00000383144
-0.0497
58501
ENSG00000285745
general transcription factor IIH subunit 5 (GTF2H5) pseudogene
-0.0497
58500
ENSG00000285744
novel transcript
-0.0497
58499
ENSG00000285743
novel transcript, LINP1-LINC00707 readthrough
-0.0497
58498
ENSG00000285742
novel transcript
-0.0497
58497
ENSG00000285741
novel transcript
-0.0497
58496
ENSG00000285740
novel transcript
-0.0497
58495
ENSG00000285739
novel transcript, antisense to NRG3
-0.0497
58494
ENSG00000285738
Novel transcript
-0.0497
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
Now loading...
