Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269044

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269044


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T74Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 97.1884
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 77.2090
3 ENSG00000182718 ANXA2 annexin A2 64.0489
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 55.5679
5 ENSG00000115414 FN1 fibronectin 1 53.5806
6 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 45.3522
7 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 43.3317
8 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 35.4289
9 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 33.9268
10 ENSG00000105974 CAV1 caveolin 1 32.7172

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285738 Novel transcript -0.0967
58502 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0967
58501 ENSG00000285736 Novel transcript -0.0967
58500 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0967
58499 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0967
58498 ENSG00000285733 novel protein -0.0967
58497 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0967
58496 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0967
58495 ENSG00000285729 novel transcript -0.0967
58494 ENSG00000285728 novel transcript, antisense to PPIH -0.0967

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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