Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269048

Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1269048 Profile download	6000003010000000000000-738	Sequence Read Archive	SRP033135	SRP033135_T78	Pseudo-temporal ordering of individual cells reveals regulators of differentiation	Transcriptome	Myoblast_T0 (Skeletal muscle)	Human	Muscle	RNA-seq	HiSeq 2500	Sequence

Histogram (Expression count)

Top 10 up-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
1	ENSG00000198804	MT-CO1	mitochondrially encoded cytochrome c oxidase I	99.7782
2	ENSG00000182718	ANXA2	annexin A2	83.2557
3	ENSG00000115414	FN1	fibronectin 1	71.7917
4	ENSG00000210082	MT-RNR2	mitochondrially encoded 16S rRNA	66.7649
5	ENSG00000075624	ACTB	actin beta	53.6572
6	ENSG00000159251	ACTC1	actin alpha cardiac muscle 1	44.2011
7	ENSG00000156508	EEF1A1	eukaryotic translation elongation factor 1 alpha 1	41.4862
8	ENSG00000137801	THBS1	thrombospondin 1	39.1001
9	ENSG00000198712	MT-CO2	mitochondrially encoded cytochrome c oxidase II	35.0313
10	ENSG00000198727	MT-CYB	mitochondrially encoded cytochrome b	33.5501

Bottom 10 down-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
58503	ENSG00000285740		novel transcript	-0.0889
58502	ENSG00000285739		novel transcript, antisense to NRG3	-0.0889
58501	ENSG00000285738		Novel transcript	-0.0889
58500	ENSG00000285737	LINC02680	long intergenic non-protein coding RNA 2680	-0.0889
58499	ENSG00000285736		Novel transcript	-0.0889
58498	ENSG00000285735	LINC02717	long intergenic non-protein coding RNA 2717	-0.0889
58497	ENSG00000285734		novel transcript, antisense to CACNA1C	-0.0889
58496	ENSG00000285733		novel protein	-0.0889
58495	ENSG00000285732		novel transcript, antisense to ABCD2	-0.0889
58494	ENSG00000285731		Novel transcript, antisense to TBC1D5	-0.0889

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	Z-score

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