SHOGoiN Cell Transcriptome: GSM1269049
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1269049 Profile download | 6000003010000000000000-738 | Sequence Read Archive | SRP033135 | SRP033135_T79 | Pseudo-temporal ordering of individual cells reveals regulators of differentiation | Transcriptome | Myoblast_T0 (Skeletal muscle) | Human | Muscle | RNA-seq | HiSeq 2500 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSG00000210082 | MT-RNR2 | mitochondrially encoded 16S rRNA | 173.1154 |
| 2 | ENSG00000111640 | GAPDH | glyceraldehyde-3-phosphate dehydrogenase | 39.8162 |
| 3 | ENSG00000231500 | RPS18 | ribosomal protein S18 | 36.5143 |
| 4 | ENSG00000125148 | MT2A | metallothionein 2A | 35.5711 |
| 5 | ENSG00000198886 | MT-ND4 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 | 32.2667 |
| 6 | ENSG00000087086 | FTL | ferritin light chain | 30.0689 |
| 7 | ENSG00000198712 | MT-CO2 | mitochondrially encoded cytochrome c oxidase II | 27.9714 |
| 8 | ENSG00000198938 | MT-CO3 | mitochondrially encoded cytochrome c oxidase III | 26.9394 |
| 9 | ENSG00000164111 | ANXA5 | annexin A5 | 26.8519 |
| 10 | ENSG00000211459 | MT-RNR1 | mitochondrially encoded 12S rRNA | 25.8392 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 58503 | ENSG00000285746 | putative UPF0607 protein ENSP00000383144 | -0.0455 | |
| 58502 | ENSG00000285745 | general transcription factor IIH subunit 5 (GTF2H5) pseudogene | -0.0455 | |
| 58501 | ENSG00000285744 | novel transcript | -0.0455 | |
| 58500 | ENSG00000285743 | novel transcript, LINP1-LINC00707 readthrough | -0.0455 | |
| 58499 | ENSG00000285742 | novel transcript | -0.0455 | |
| 58498 | ENSG00000285741 | novel transcript | -0.0455 | |
| 58497 | ENSG00000285740 | novel transcript | -0.0455 | |
| 58496 | ENSG00000285739 | novel transcript, antisense to NRG3 | -0.0455 | |
| 58495 | ENSG00000285738 | Novel transcript | -0.0455 | |
| 58494 | ENSG00000285737 | LINC02680 | long intergenic non-protein coding RNA 2680 | -0.0455 |
