Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269049

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269049


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T79Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 173.1154
2 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 39.8162
3 ENSG00000231500 RPS18 ribosomal protein S18 36.5143
4 ENSG00000125148 MT2A metallothionein 2A 35.5711
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 32.2667
6 ENSG00000087086 FTL ferritin light chain 30.0689
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 27.9714
8 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 26.9394
9 ENSG00000164111 ANXA5 annexin A5 26.8519
10 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S rRNA 25.8392

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285746 putative UPF0607 protein ENSP00000383144 -0.0455
58502 ENSG00000285745 general transcription factor IIH subunit 5 (GTF2H5) pseudogene -0.0455
58501 ENSG00000285744 novel transcript -0.0455
58500 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0455
58499 ENSG00000285742 novel transcript -0.0455
58498 ENSG00000285741 novel transcript -0.0455
58497 ENSG00000285740 novel transcript -0.0455
58496 ENSG00000285739 novel transcript, antisense to NRG3 -0.0455
58495 ENSG00000285738 Novel transcript -0.0455
58494 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0455

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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