SHOGoiN Cell Transcriptome: GSM1269064

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269064


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T90Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 147.7527
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 93.9457
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 59.2458
4 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 41.3419
5 ENSG00000075624 ACTB actin beta 35.1448
6 ENSG00000184009 ACTG1 actin gamma 1 33.1205
7 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 32.7386
8 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 32.4330
9 ENSG00000182718 ANXA2 annexin A2 30.7142
10 ENSG00000137801 THBS1 thrombospondin 1 26.6083

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285742 novel transcript -0.0803
58502 ENSG00000285741 novel transcript -0.0803
58501 ENSG00000285740 novel transcript -0.0803
58500 ENSG00000285739 novel transcript, antisense to NRG3 -0.0803
58499 ENSG00000285738 Novel transcript -0.0803
58498 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0803
58497 ENSG00000285736 Novel transcript -0.0803
58496 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0803
58495 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0803
58494 ENSG00000285733 novel protein -0.0803

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...