Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269078

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269078


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T100Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 100.9815
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 77.5316
3 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 61.8270
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 57.6774
5 ENSG00000167601 AXL AXL receptor tyrosine kinase 45.2584
6 ENSG00000075624 ACTB actin beta 34.2497
7 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 33.7624
8 ENSG00000197061 H4C3 H4 clustered histone 3 33.5409
9 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 32.3595
10 ENSG00000123416 TUBA1B tubulin alpha 1b 30.0854

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285736 Novel transcript -0.1130
58502 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1130
58501 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1130
58500 ENSG00000285733 novel protein -0.1130
58499 ENSG00000285732 novel transcript, antisense to ABCD2 -0.1130
58498 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.1130
58497 ENSG00000285729 novel transcript -0.1130
58496 ENSG00000285727 novel transcript -0.1130
58495 ENSG00000285726 novel transcript -0.1130
58494 ENSG00000285725 novel transcript -0.1130

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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