SHOGoiN Cell Transcriptome: GSM1269097

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269097


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T116Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 93.3449
2 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 87.6727
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 66.1387
4 ENSG00000182718 ANXA2 annexin A2 62.2303
5 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 52.5355
6 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 49.5154
7 ENSG00000167601 AXL AXL receptor tyrosine kinase 43.8686
8 ENSG00000167552 TUBA1A tubulin alpha 1a 43.1580
9 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 30.4558
10 ENSG00000088448 ANKRD10 ankyrin repeat domain 10 29.1488

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285742 novel transcript -0.1004
58502 ENSG00000285741 novel transcript -0.1004
58501 ENSG00000285740 novel transcript -0.1004
58500 ENSG00000285739 novel transcript, antisense to NRG3 -0.1004
58499 ENSG00000285738 Novel transcript -0.1004
58498 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.1004
58497 ENSG00000285736 Novel transcript -0.1004
58496 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1004
58495 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1004
58494 ENSG00000285733 novel protein -0.1004

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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